Table 2. Results of the Best Poses of the Docking of MA, OA, Compound 18, and NF-κB Inhibitor 6,6-Dimethyl-2-(phenylimino)-6,7-dihydrobenzo[d][1,3]oxathiol-4(5H)-one (BOT) with p52:v-Rel and a Comparison with Experimental IC50 for the Human Colon Carcinoma T-84 Cell Line.
compound | ranka | fullfitnessb | binding site | ΔGc | estimated Kd (μM) | experimental IC50 (μM) |
---|---|---|---|---|---|---|
MA | 0 0 | –4218.29 | p52 | –8.825026 | 0.34 | 50.2 |
1 2 | –4202.93 | v-Rel | –6.383734 | 20.81 | ||
OA | 0 0 | –4225.85 | v-Rel | –6.554255 | 15.61 | 89.4 |
BOT | 0 0 | –4286.02 | p52 | –7.619894 | 2.58 | |
18 | 0 0 | –4156.36 | p52 | –9.658060 | 0.08 | 45.6 |
Rank resulting from the scoring function.
Total energy of the system including solvation.
Computed ΔG of the interaction.