Table 2.
Gene | Variation ID | Primer sequence 5′- 3′ | Restriction enzyme | References | |
---|---|---|---|---|---|
SFTPA2 | rs1059046 | F | GCT GTG CCC TCT GGC CCT Ta | Tru 91 | (136) |
R | TCC TTT GAC ACC ATC TC | ||||
rs17886395 | F | AGA GCG TGG AGA GAA GGG GcA | Bbv I | ||
R | GGG TTT GTC TGA TCC CCA TC | ||||
rs1965707 | F | CAT AAT GAC AGT AGG AGA GAA GGT CTT CTC | Bfa I | ||
R | ACC CTC AGT CAG GCC TAC AT | ||||
rs1965708 | F | GGA GCC TGC AGG TCG GGG AAA Atc G | αTaq I | ||
R | TCA GAA CTC ACA GAT GGT CA | ||||
SFTPA1 | rs1059047 | F | ACC TCA TCT TGA TGT CAG CCT CTG GTG CaG | Bbv I | (136) |
R | AGG GCC CAG GTC TCC TCT GA | ||||
rs1136450 | F | ACC TCA TCT TGA TGT CAG CCT CTG GTG CaG | Dde I | ||
R | AGG GCC AGG GTC TCC TcT GA | ||||
rs1136451 | F | TTT TCT CTG CAG GCC CCA TGG GTg C | Hha I | ||
R | GGG TTT GTC TGA TCC CCA TC | ||||
rs1059057 | F | TCT GCA GGG CTC CAT ATT Gc | Msp I | ||
R | CAC ACA CTG CTC TTT TCC tC | ||||
rs4253527 | F | TCT GCA GGG CTC CAT ATT Gc | αTaq I | ||
R | CAC ACA CTG CTC TTT TCC tC | (133) | |||
SFTPB | rs2077079 | F | GTC CAG CTA TAA GGG GCC GTG | ApaL I | |
R | GTG AGT GGT GGA GCT GCC TA | ||||
rs3024798 | F | ACT CTT GTG TCC TCC ACC TTG | Nla III | ||
R | GGC ATA GGT CAT CCT GGG CA | ||||
rs1130866 | F | CTC GAA TTC ACT CGT GAA CTC CAG CAC CC | Dde I | ||
R | GTG AGC TTG CAG CCC TCT CA | ||||
rs7316 | F | CTG TGT AAT ACA ATG TCT GCA CTA | Bfa I | ||
R | CTC GAA TTC TGC TGG GAT TGC AGG TGT GA | ||||
SFTPC | rs4715 | F | GCT GAT CGC CTA CAA GCC CAG | Spe I | (61) |
R | CTG GAA GTT GTG GAC TTT aCT A | ||||
rs1124 | F | GAT GGA ATG CTC TCT GCA GG | Sac I | ||
R | GCA CCT CGC CAC ACA GGG aG | ||||
SFTPD | rs721917 | F | CTC CTC TCT GCA CTG GTC AT | Fsp I | (136) |
R | ACC AGG GTG CAA GCA CTG cG | ||||
rs2243639 | F | AGC GTG GAG TCC CTG GAA gC | Hha I | ||
R | AGA TTC TCT CCA TGT TCC CAG |
Low case letters: mismatch to DNA sequence.