Table VI.
Predicted target genes of downregulated miRNAs.
| miRNA | Target gene | Representative transcript | Gene name |
|---|---|---|---|
| miR-221 | KHDRBS2 | NM_152688 | KH domain containing, RNA binding, signal transduction associated 2 |
| FOS | NM_005252 | FBJ murine osteosarcoma viral oncogene homolog | |
| ARID1A | NM_006015 | AT rich interactive domain 1A (SWI-like) | |
| BMF | NM_001003943 | Bcl2 modifying factor | |
| HIPK1 | NM_181358 | Homeodomain interacting protein kinase 1 | |
| MESDC1 | NM_022566 | Mesoderm development candidate 1 | |
| MAT2A | NM_005911 | Methionine adenosyltransferase II, alpha | |
| ZEB2 | NM_001171653 | Zinc finger E-box binding homeobox 2 | |
| MYLIP | NM_013262 | Myosin regulatory light chain interacting protein | |
| PHF2 | NM_005392 | PHD finger protein 2 | |
| RSBN1L | NM_198467 | Round spermatid basic protein 1-like | |
| ARF4 | NM_001660 | ADP-ribosylation factor 4 | |
| CBFB | NM_001755 | Core-binding factor, beta subunit | |
| CDKN1B | NM_004064 | Cyclin-dependent kinase inhibitor 1B (p27, Kip1) | |
| CHSY1 | NM_014918 | Chondroitin sulfate synthase 1 | |
| RAB1A | NM_004161 | RAB1A, member RAS oncogene family | |
| miR-222 | ARF4 | NM_001660 | ADP-ribosylation factor 4 |
| ARID1A | NM_006015 | AT rich interactive domain 1A (SWI-like) | |
| CDKN1B | NM_004064 | Cyclin-dependent kinase inhibitor 1B (p27, Kip1) | |
| DMRT3 | NM_021240 | Doublesex and mab-3 related transcription factor 3 | |
| EIF3J | NM_001284335 | Eukaryotic translation initiation factor 3, subunit J | |
| FOS | NM_005252 | FBJ murine osteosarcoma viral oncogene homolog | |
| KIF16B | NM_001199865 | Kinesin family member 16B | |
| MAT2A | NM_005911 | Methionine adenosyltransferase II, alpha | |
| MESDC1 | NM_022566 | Mesoderm development candidate 1 | |
| MYLIP | NM_013262 | Myosin regulatory light chain interacting protein | |
| PHF2 | NM_005392 | PHD finger protein 2 | |
| RBM24 | NM_001143941 | RNA binding motif protein 24 | |
| YWHAG | NM_012479 | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma | |
| ZEB2 | NM_001171653 | Zinc finger E-box binding homeobox 2 | |
| miR-484 | SNRNP200 | NM_014014 | Small nuclear ribonucleoprotein 200 kDa (U5) |
| CCDC53 | NM_001301107 | Coiled-coil domain containing 53 | |
| FAM120A | NM_001286722 | Family with sequence similarity 120A | |
| HOXA5 | NM_019102 | Homeobox A5 | |
| MAP2 | NM_002374 | Microtubule-associated protein 2 | |
| OGDH | NM_002541 | Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) | |
| PKD2L1 | NM_016112 | Polycystic kidney disease 2-like 1 | |
| SLC20A2 | NM_006749 | Solute carrier family 20 (phosphate transporter), member 2 | |
| VEGFB | NM_003377 | Vascular endothelial growth factor B | |
| ZFYVE1 | NM_021260 | Zinc finger, FYVE domain containing 1 | |
| MAP3K11 | NM_002419 | Mitogen-activated protein kinase kinase kinase 11 | |
| PI4KB | NM_001198773 | Phosphatidylinositol 4-kinase, catalytic, beta | |
| ATP7B | NM_000053 | ATPase, Cu++ transporting, beta polypeptide | |
| MYCBP2 | NM_015057 | MYC binding protein 2 | |
| MMP14 | NM_004995 | Matrix metallopeptidase 14 (membrane-inserted) | |
| miR-502-3p | KCTD9 | NM_017634 | Potassium channel tetramerisation domain containing 9 |
| RNF144A | NM_014746 | Ring finger protein 144A | |
| DOK6 | NM_152721 | Docking protein 6 | |
| PTPRF | NM_002840 | Protein tyrosine phosphatase, receptor type, F | |
| PDE3B | NM_000922 | Phosphodiesterase 3B, cGMP-inhibited | |
| RORA | NM_002943 | RAR-related orphan receptor A | |
| MYCN | NM_005378 | V-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog | |
| DAPK1 | NM_004938 | Death-associated protein kinase 1 | |
| ADAMTS3 | NM_014243 | ADAM metallopeptidase with thrombospondin type 1 motif, 3 | |
| CBLL1 | NM_024814 | Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase | |
| RBMS1 | NM_002897 | RNA binding motif, single stranded interacting protein 1 |
miRNA/miR, microRNA.