Skip to main content
. 2018 Sep 19;9:1035. doi: 10.3389/fphar.2018.01035

Table 1.

Statistical parameters of four different PLS models developed from GRIND using different 3D conformational inputs.

Conformational method Fractional factorial design (FFD) cycle Comment FFD2 (LV2)
Complete variable FFD1 FFD2
qLOO2 r2 SDEP qLOO2 r2 SDEP qLOO2 r2 SDEP
Minimum energy conformation 0.38 0.51 1.09 0.45 0.56 1.09 0.45 0.56 1.09 Non-consistent with respect to auto and cross-correlogram
Stochastic search conformation 0.34 0.45 1.08 0.42 0.51 1.01 0.46 0.53 0.91 Non-consistent with respect to auto and cross-correlogram
Docking conformations 0.32 0.46 1.12 0.39 0.51 1.08 0.47 0.56 1.41 Non-consistent with respect to auto and cross-correlogram
Standard 3D conformations 0.54 0.62 0.94 0.61 0.67 0.86 0.63 0.69 0.84 Consistent with respect to TIP-TIP,
DRY-TIP,
and N1-N1
correlogram (Figure 6)

The bold number represents finally selected model.