Table 3:
Probe of Top Differentially Methylated CpGs Within Cohort Including Functions, Significance and Direction of Change (ID = Illumina Probe ID, Chr = Chromosome, logFC = log fold change, T = t-statistic, Pvalue = unadjusted P-value, adj.p.Val = adjusted Pvalue, B = Bayes Factor)
| Rank | ID | Chr | Gene | logFC | t | PValue | adj.PVal | B |
|---|---|---|---|---|---|---|---|---|
| 1 | cg08626004 | 19 | GNG7 | -4.32 | -12.2 | 7.92E-09 | 0.0011 | 8.97 |
| 2 | cg03507241 | 18 | TUBB6 | -0.31 | -13.5 | 2.62E-08 | 0.0013 | 8.86 |
| 3 | cg25848557 | 1 | VAV3 | 4.97 | 19.0 | 2.64E-09 | 0.0014 | 8.30 |
| 4 | cg03280624 | 19 | ZNF583 | 5.82 | 18.0 | 4.39E-09 | 0.0016 | 8.11 |
| 5 | cg12035092 | 2 | KIF5C | 3.99 | 16.3 | 1.18E-08 | 0.0016 | 7.69 |
| 6 | cg12863545 | 17 | PIK3R5 | 4.15 | 15.5 | 1.89E-08 | 0.0017 | 7.47 |
| 7 | cg00796360 | 19 | ZNF583 | 4.05 | 15.1 | 2.46E-08 | 0.0017 | 7.35 |
| 8 | cg24347663 | 2 | ADD2 | 4.23 | 14.8 | 3.06E-08 | 0.0018 | 7.24 |
| 9 | cg22260952 | 12 | CHST11 | 3.38 | 13.9 | 5.63E-08 | 0.0024 | 6.93 |
| 10 | cg23977631 | 2 | LONRF2 | 4.75 | 13.4 | 7.67E-08 | 0.0025 | 6.76 |
| 11 | cg13644629 | 19 | ZNF549 | 4.22 | 13.3 | 8.30E-08 | 0.0025 | 6.72 |
| 12 | cg26998044 | 17 | PIK3R5 | 3.86 | 13.1 | 9.82E-08 | 0.0027 | 6.63 |
| 13 | cg13916740 | 19 | ZNF582 | 4.55 | 13.1 | 1.02E-07 | 0.0027 | 6.60 |
| 14 | cg19538890 | 4 | RNF150 | 2.91 | 9.3 | 2.38E-07 | 0.0312 | 6.58 |
| 15 | cg27230784 | 17 | LOC728392 | 3.82 | 13.0 | 1.08E-07 | 0.0027 | 6.57 |
| 16 | cg27009208 | 19 | ZNF583 | 4.72 | 12.9 | 1.12E-07 | 0.0027 | 6.55 |
| 17 | cg23967742 | 10 | CH25H | 4.32 | 9.0 | 3.68E-07 | 0.0312 | 6.24 |
| 18 | cg12936797 | 4 | RNF150 | 2.67 | 8.8 | 4.33E-07 | 0.0312 | 6.12 |
| 19 | cg08071282 | 16 | TPSD1 | -1.96 | -8.5 | 6.70E-07 | 0.0312 | 5.78 |
| 20 | cg06168875 | 19 | NANOS3 | -2.25 | -8.5 | 6.84E-07 | 0.0312 | 5.76 |