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. Author manuscript; available in PMC: 2018 Oct 9.
Published in final edited form as: Biochemistry. 2018 Sep 24;57(40):5827–5840. doi: 10.1021/acs.biochem.8b00650

Table 3.

Equilibrium and Kinetic Parameters for the Alkaline Transition and Imidazole Binding for Yeast Iso-1 Ferric Cyt c Variantsa

variant kf (s−1) kb × 102 (s−1) Kc × 10−2 pKH pKab KappIm(mM−1)c koffMet(s−1)c
WT* 41.0 ± 4.4 8.0 ± 1.5 5.1 ± 1.1 11.5 ± 0.1 8.8 ± 0.1d 0.36 ± 0.04 39 ± 13
WTe 48 ± 2 3.5 ± 1 13.9 ± 8 11.7 ± 2 8.7 ± 2 n.d. n.d.
K79G 8.4 ± 1.9 10.6 ± 3.4 0.8 ± 0.3 10.5 ± 0.1 8.6 ± 0.1d 1.1 ± 0.1 50 ± 7
K79Ae 160 ± 5 4.0 ± 7 40 ± 70 12.0 ± 3 8.44 ± 1 n.d. n.d.
a

The WT and K79A variants contain tmK72 and a background C102T mutation, whereas WT* and K79G contain K72A and C102S mutations.

b

pKa values were determined by pH titration experiments. According to the mechanism of the alkaline transition, pKa equals the sum of pKH and pKc.

c

KappIm represents the apparent binding constant of imidazole and koffMet is the rate constant of Met80 dissociation.

d

From ref 28.

e

From ref 15.