Table 4.
Hepeviridae | Degree of identity (%) | |||||||
---|---|---|---|---|---|---|---|---|
Full genome | ORF1 | ORF2 | ORF3 | |||||
nt | nt | aa | nt | aa | nt | aa | ||
Orthohepevirus A | HEV-1 | 50.7–51.0 | 49.9–50.1 | 46.9–47.6 | 55.2–55.3 | 53.6 | 40.2–40.7 | 20.9–23.3 |
HEV-2 | 50.3–50.7 | 50.0–50.2 | 47.2–48.2 | 54.0–54.2 | 52.6 | 38.3–38.8 | 19.4–20.9 | |
HEV-3 | 50.4 | 50.1 | 47.2–48.2 | 55.4 | 52.6–52.7 | 40.5–40.8 | 20.3–22.7 | |
HEV-4 | 50.0 | 49.9–50.0 | 47.2–48.1 | 54.5–54.9 | 51.2–51.4 | 38.8–39.4 | 23.3–24.0 | |
HEV-5 | 50.8–51.0 | 50.3 | 47.0–47.8 | 55.0 | 52.8–52.9 | 40.3–40.5 | 19.7–20.5 | |
HEV-6 | 50.0–50.5 | 49.9–50.0 | 47.7–48.5 | 54.0–54.5 | 53.5 | 41.1 | 20.5–22.0 | |
HEV-7 | 50.8–51.2 | 50.4–51.0 | 47.6–48.4 | 54.5–54.8 | 54.5–54.7 | 41.6–42.7 | 20.3–21.1 | |
Orthohepevirus B | 44.8–45.0 | 46.5–46.6 | 40.7–41.5 | 45.4–45.5 | 40.1 | 23.2–23.8 | 11.6–12.4 | |
Orthohepevirus C | HEV-C1 | 55.9–56.8 | 52.4–54.1 | 52.4–53.5 | 60.5–61.8 | 61.1–62.8 | 42.3–47.9 | 22.3–24.8 |
HEV-C2 | 55.1–56.1 | 53.5–54.2 | 52.8–54.3 | 57.8–59.7 | 58.4–58.8 | 45.7–46.3 | 22.0–26.3 | |
RdHEVAc | 56.4–56.8 | 52.4–52.7 | 51.6–53.4 | 61.2–62.0 | 62.2–62.8 | 45.5–45.8 | 23.5–25.2 | |
Orthohepevirus D | 46.7–46.9 | 47.7–47.9 | 41.2–41.8 | 48.0–48.2 | 44.1–44.2 | 27.7–27.9 | 17.1 | |
Piscihepevirus A | 34.6–35.0 | 36.1–36.4 | 24.5–24.9 | 30.7–30.9 | 16.7 | 17.5–17.9 | 11.4 |
The sequences were aligned using MAFFT. The evolutionary analyses were conducted using MEGA version 7. The GenBank Accession numbers are as follows: M73218 for HEV-1; M74506 for HEV-2; AF082843 for HEV-3; AJ272108 for HEV-4; AB573435 for HEV-5; AB602441 for HEV-6; KJ496143 for HEV-7; AY535004 for Orthohepevirus B; AB847309, AB847305, AB847306, AB847308, AB847307, GU345043, GU345042, JN167537, and JN167538 for HEV-C1; AB890001, JN998607, and JN998606 for HEV-C2; JQ001749 for Orthohepevirus D; and HQ731075 for Piscihepevirus A. RdHEVAC14 and RdHEVAC86 for RdHEVAc; RdHEVEM40 and RdHEVEm67 for RdHEVEm. Nucleotide for nt; amino acid for aa; and not available for NA.