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. 2018 Oct 10;9:4189. doi: 10.1038/s41467-018-06666-4

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 1 — Differential interactions between TSCs and ESCs. a Venn diagrams comparing the significant interactions from TSC and ESC PCHi-C data, separated into interactions with non-promoter regions (promoter–genome) or with other promoters (promoter–promoter). b Examples of differential interactions between TSCs and ESCs. Read counts of fragments interacting with selected promoters are displayed, with differential interactions highlighted in red. c Genome browser view of the Hoxa gene cluster highlighting a reduction in intra-cluster interactions in TSC cells