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. 2018 Oct 10;9:4189. doi: 10.1038/s41467-018-06666-4

Fig. 3.

Fig. 3

ESC-specific H3K27me3 homotypic interactions require PRC1. a Number of wild-type homotypic interactions (involving the indicated proteins/modifications) found in Ring1A KO or Ring1A/B DKO ESCs. b Strength of the preserved homotypic interactions (measured as log2 observed/expected PCHi-C signal) in Ring1A KO or Ring1A/B DKO ESCs. ***p < 0.0005 (t-test, corrected for multiple KO-DKO comparisons). c Expression ratio (log2) between Ring1A/B DKO and Ring1A KO ESCs for genes involved in either H3K27me3 or CTCF homotypic interactions (all or ESC-specific), and compared with genes not involved in homotypic interactions. ***p < 0.0005 (t-test). d Interaction profiles in Ring1A KO or Ring1A/B DKO ESCs for the regions highlighted in Fig. 2e, f. e Expression ratio between Ring1A/B DKO and Ring1A KO ESCs for TSC-expressed genes involved in the interactions highlighted in d. Boxplot midline represents median, box edges the first and third quartiles, and whisker edges are the last data points within 1.5× the interquartile range