Table 5.
Number of genes of P. maritimus Y42 with the general COG functional categories
| Code | Value | % of totala | Description |
|---|---|---|---|
| J | 225 | 7.34 | Translation, ribosomal structure and biogenesis |
| A | 0 | 0 | RNA processing and modification |
| K | 185 | 6.04 | Transcription |
| L | 117 | 3.82 | Replication, recombination and repair |
| B | 1 | 0.03 | Chromatin structure and dynamics |
| D | 36 | 1.17 | Cell cycle control, Cell division, chromosome partitioning |
| V | 71 | 2.32 | Defense mechanisms |
| T | 144 | 4.7 | Signal transduction mechanisms |
| M | 134 | 4.37 | Cell wall/membrane biogenesis |
| N | 47 | 1.53 | Cell motility |
| U | 33 | 1.08 | Intracellular trafficking and secretion |
| O | 118 | 3.85 | Posttranslational modification, protein turnover, chaperones |
| C | 183 | 5.97 | Energy production and conversion |
| G | 172 | 5.61 | Carbohydrate transport and metabolism |
| E | 297 | 9.69 | Amino acid transport and metabolism |
| F | 95 | 3.1 | Nucleotide transport and metabolism |
| H | 161 | 5.25 | Coenzyme transport and metabolism |
| I | 172 | 5.61 | Lipid transport and metabolism |
| P | 187 | 6.1 | Inorganic ion transport and metabolism |
| Q | 95 | 3.1 | Secondary metabolites biosynthesis, transport and catabolism |
| R | 325 | 10.6 | General function prediction only |
| S | 180 | 5.87 | Function unknown |
| – | 1587 | 37.05 | Not in COGs |
aThe total is based on the total number of protein coding genes in the genome