Skip to main content
. 2018 Oct 1;24:6946–6967. doi: 10.12659/MSM.909747

Supplementary Table 1.

Individual CpG sites associated with NAFLD (q<0.05) in circulating leukocytes. (N=64).

Probe ID p NAFLD q NAFLD NAFLD mean β CL mean β Difference (% points) Gene symbol UCSC RefGene Acession Relation to gene region Relation to CpG island
cg00150500 5.05E-08 0.003526 0.040611 0.026409 0.014201229 HCFC1R1; THOC6 NM_017885; NM_001002018; NM_001002017; NM_001142350; NM_024339 Body; TSS1500 Island
cg01693328 3.78E-06 0.037736 0.734933 0.689903 0.045030407 S_Shelf
cg02013957 2.80E-07 0.008217 0.069828 0.108342 −0.03851329 CAGE1; RIOK1 NM_205864; NM_031480; NM_001170693; NM_001170692 TSS1500; Body S_Shore
cg03511638 7.43E-06 0.04944 0.207524 0.192478 0.015045277 FBXL15 NM_024326; NM_024326 1st Exon; 5′UTR Island
cg03615240 2.36E-06 0.029878 0.234903 0.217214 0.01768861 Island
cg03753066 2.57E-06 0.029878 0.042778 0.033719 0.009058818 PGPEP1 NM_017712 TSS200 N_Shore
cg03956053 4.68E-06 0.040684 0.094807 0.069568 0.025238064 Island
cg03992938 7.18E-06 0.04944 0.201834 0.1878 0.014034138 CCDC13 NM_144719; NM_144719 1st Exon; 5′UTR Island
cg04160753 5.99E-06 0.046488 0.275213 0.255442 0.019770564 C10orf91 NM_173541 TSS1500
cg04396550 3.68E-12 1.54E-06 0.037964 0.025583 0.012380549 KCNQ3 NM_004519 TSS1500 Island
cg04787602 2.61E-07 0.008217 0.161306 0.144232 0.017073828 C1orf183 NM_198926; NM_019099 Body; TSS1500 Island
cg04981696 5.54E-07 0.012898 0.559923 0.491968 0.067954905 ABCC1 NM_019862; NM_019898; NM_019899; NM_004996; NM_019900 Body S_Shore
cg05102190 7.38E-06 0.04944 0.292254 0.261536 0.030718122 ZYX NM_003461; NM_001010972 TSS200 Island
cg06706068 6.62E-06 0.04866 0.450319 0.399254 0.051064413 RPUSD1 NM_058192 3′UTR N_Shore
cg07067744 6.97E-06 0.04944 0.920563 0.90232 0.018243335 BRSK2 NM_003957 Body
cg07112456 6.04E-07 0.013311 0.931972 0.912429 0.019543021 LRWD1 NM_152892 Body S_Shelf
cg07953400 1.74E-06 0.02696 0.054226 0.045265 0.008961501 PIGQ NM_004204; NM_148920 TSS1500; TSS1500 N_Shore
cg07956264 1.06E-07 0.006374 0.060192 0.042644 0.017547367 GPATCH3 NM_022078 1st Exon Island
cg08013262 2.14E-06 0.028915 0.051125 0.040134 0.010991397 INSR NM_000208; NM_001079817 Body Island
cg09367046 6.48E-06 0.048457 0.078046 0.057973 0.020073316 ANGEL1 NM_015305 TSS200 Island
cg09826692 3.66E-07 0.009581 0.695734 0.717446 −0.0217123 Island
cg10077144 6.43E-06 0.048457 0.151084 0.136608 0.014476221 Island
cg10178228 2.57E-06 0.029878 0.16383 0.11116 0.052670088 FRMD4B NM_015123 TSS200 S_Shore
cg10576516 2.94E-07 0.008217 0.046487 0.034138 0.01234886 RECQL5; SAP30BP NM_001003716; NM_013260; NM_001003715; NM_013260; NM_004259 TSS200; 1st Exon; 5′UT Island
cg12289509 9.38E-07 0.019426 0.12632 0.116298 0.010022888 TUBE1 NM_016262; NM_001033564 Body; TSS200 Island
cg12362980 3.73E-06 0.037736 0.890648 0.915371 −0.02472296 Island
cg13291296 1.94E-06 0.028151 0.928293 0.567811 0.360481701 GPR125 NM_145290 Body
cg13373361 9.74E-07 0.019426 0.972063 0.958036 0.014027139 MYH16 NR_002147 Body
cg13397649 2.39E-06 0.029878 0.184331 0.171045 0.013286234 AFG3L2 NM_006796 1st Exon Island
cg13463639 1.14E-07 0.047685 0.795196 0.744952 0.050244062 SIGIRR NM_001135053; NM_021805 TSS1500 S_Shore
cg13920768 4.76E-06 0.040684 0.180692 0.16038 0.02031251 PRDM12 NM_021619 3′UTR Island
cg14214745 1.61E-06 0.025892 0.030079 0.02396 0.006119444 CRELD1 NM_001077415; NM_001031717; NM_015513; NM_015513; NM_001077415; NM_001031717 1st Exon; 5′UTR Island
cg14247318 2.91E-06 0.032137 0.06859 0.051255 0.017334521 S_Shore
cg14451560 4.08E-06 0.038185 0.163369 0.130014 0.033355016 ARRDC1 NM_152285 TSS1500 N_Shore
cg15317837 4.86E-06 0.0407 0.082077 0.065888 0.016188353 GTPBP4 NM_012341 TSS1500 Island
cg15653194 1.99E-09 0.000271 0.077077 0.051633 0.025443482 LFNG NM_001166355; NM_002304; NM_001040168; NM_001040167 Body; TSS200 Island
cg16105594 1.46E-06 0.025002 0.222788 0.206881 0.015907317 MEF2C NM_001131005; NM_002397 5′UTR; TSS1500 Island
cg16261091 5.26E-06 0.042403 0.871221 0.768176 0.103045403 C17orf101; HEXDC NM_175902; NM_173620; NM_024648 Body; TSS1500 N_Shore
cg16357287 1.96E-07 0.007527 0.033464 0.022286 0.011177644 SEH1L NM_001013437; NM_031216 TSS1500 N_Shore
cg16398128 1.66E-07 0.007527 0.038963 0.025503 0.01345955 ZNF622 NM_033414; NM_033414 5′UTR; 1st Exon Island
cg16416718 4.04E-06 0.038185 0.168379 0.155538 0.012840944 CAMTA1 NM_015215 TSS1500 Island
cg16487280 1.11E-06 0.020289 0.163618 0.146336 0.017282797 MYBL2 NM_002466 TSS1500 Island
cg17162475 1.08E-06 0.020289 0.136101 0.120308 0.015793168 C6orf150 NM_138441 TSS200 Island
cg17176517 5.44E-06 0.042966 0.055192 0.043187 0.012004537 SNX4 NM_003794; NM_003794 5′UTR; 1st Exon Island
cg18570553 3.67E-06 0.037736 0.144011 0.128948 0.015063351 PRR15 NM_175887 TSS200 N_Shore
cg18848688 1.42E-08 0.001192 0.143981 0.325489 −0.18150742 LIFR NM_001127671; NM_002310 TSS1500; 5′UTR Island
cg19137662 1.98E-07 0.007527 0.045624 0.032493 0.013131109 NOP56 NM_006392; NR_031699; NR_027700; NR_003078 Body; TSS200 Island
cg19189310 1.49E-06 0.025002 0.201487 0.18607 0.015416665 RPS10 NM_001014 5′UTR Island
cg21786114 2.28E-07 0.007946 0.516219 0.460762 0.055456681 EHMT2 NM_006709; NM_025256 TSS1500 N_Shore
cg22185268 3.99E-07 0.009831 0.026994 0.020076 0.006918145 COMMD4 NM_017828 TSS200 Island
cg22402398 2.50E-06 0.029878 0.939115 0.923689 0.015425828 FGR NM_001042747; NM_005248; NM_001042729 TSS1500; 5′UTR
cg22598233 3.16E-06 0.033997 0.069128 0.056446 0.012681401 POLRMT NM_005035 TSS200 Island
cg22721468 1.96E-06 0.028151 0.060214 0.04424 0.01597372 SH3BP5L NM_030645 TSS1500 Island
cg22746421 1.52E-07 0.007527 0.87434 0.852661 0.021678989
cg23224405 2.59E-09 0.000271 0.064945 0.045018 0.019927219 DUSP16 NM_030640; NM_030640 1st Exon; 5′UTR Island
cg24199050 2.65E-06 0.029971 0.010376 0.006359 0.004017477 GTSE1 NM_016426; NR_024009 TSS200 Island
cg24239690 7.36E-06 0.04944 0.196241 0.181611 0.014630372 FSCN1 NM_003088 Body S_Shore
cg24689754 4.95E-06 0.0407 0.029538 0.020196 0.009341864 C19orf62 NM_001033549; NM_001033549; NM_014173; NM_014173 5′UTR; 1st Exon
cg25295726 1.84E-09 0.000271 0.181557 0.162827 0.018730389 FUT11 NM_173540 TSS200 Island
cg25456633 4.20E-06 0.038224 0.897003 0.878185 0.018817636
cg25818813 4.10E-06 0.038185 0.064429 0.050092 0.014336947 MERTK NM_006343 Body Island
cg26105057 2.02E-06 0.028151 0.160883 0.126787 0.034095982 PAN2 NM_014871; NM_001166279; NM_001127460; NM_014871; NM_001166279 1st Exon; 5′UTR; TSS200 Island
cg26309655 4.66E-06 0.040684 0.16828 0.148223 0.02005632 TARS2 NM_025150 TSS200
cg12473838 4.88E-06 0.028795 0.040501 0.031202 0.009299747 SSBP1 NM_003143; NR_015392 TSS200; Body Island
cg26786980 6.79E-06 0.049042 0.220594 0.183155 0.037438788 RARB NM_016152; NM_016152; NM_000965; NM_000965 5′UTR; 1st Exon