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. 2018 Oct 1;24:6946–6967. doi: 10.12659/MSM.909747

Supplementary Table 2.

Individual CpG sites associated with simple hepatic steatosis (q<0.05) in circulating leukocytes. (N=119).

Probe ID p Simple hepatic steatosis q Simple hepatic steatosis Simple hepatic steatosis mean β CL mean β Difference (% points) Gene symbol UCSC RefGene acession Relation to gene region Relation to CpG island
cg00150500 0.00000 0.00005 0.04354 0.02641 0.01713 HCFC1R1; THOC6 NM_017885; NM_001002018; NM_001002017; NM_001142350; NM_024339 Body; TSS1500 Island
cg00574958 0.00000 0.02625 0.13777 0.19441 −0.05664 CPT1A; CPT1A NM_001876; NM_001031847 5′UTR N_Shore
cg00639286 0.00001 0.03794 0.11783 0.09329 0.02454 ATOX1 NM_004045 Body Island
cg00932007 0.00000 0.02625 0.07328 0.04803 0.02525 SERINC1; PKIB NM_020755; NM_181794; NM_020755 1st Exon; TSS200; 5′UTR Island
cg01067963 0.00001 0.02968 0.06460 0.04919 0.01541 MAPK1 NM_138957; NM_002745 TSS1500 Island
cg01216607 0.00001 0.04888 0.13731 0.11167 0.02564 ZNHIT1; PLOD3 NM_006349; NM_001084; NM_001084 TSS1500; 1st Exon; 5′UTR Island
cg01525244 0.00000 0.00830 0.22203 0.17144 0.05059 CBX7 NM_175709 TSS200 N_Shore
cg01801101 0.00000 0.02176 0.31191 0.27460 0.03730 AMZ1 NM_133463 5′UTR N_Shore
cg02432888 0.00001 0.03410 0.92622 0.93604 −0.00982 SMARCA4 NM_001128845; NM_001128844; NM_001128848; NM_001128846; NM_003072; NM_001128849; NM_001128847 1st Exon; Body N_Shelf
cg02581963 0.00000 0.00977 0.09723 0.06908 0.02816 C10orf75 NR_026762 TSS200 Island
cg03027241 0.00000 0.01712 0.35425 0.42982 −0.07557 KCNG1 NM_002237 3′UTR Island
cg03069383 0.00001 0.04806 0.22846 0.20088 0.02758 RDH14 NM_020905 1st Exon Island
cg03074984 0.00001 0.04262 0.22030 0.19083 0.02947 RPS6KA4 NM_003942; NM_001006944 TSS200 Island
cg03511638 0.00000 0.02698 0.21013 0.19248 0.01765 FBXL15 NM_024326; NM_024326 1st Exon; 5′UTR Island
cg03956053 0.00000 0.00468 0.10087 0.06957 0.03130 Island
cg03992938 0.00000 0.02085 0.20399 0.18780 0.01619 CCDC13 NM_144719; NM_144719 1st Exon; 5′UTR Island
cg04396550 0.00000 0.00000 0.03999 0.02558 0.01440 KCNQ3 NM_004519 TSS1500 Island
cg04551440 0.00000 0.02375 0.06975 0.05204 0.01771 KATNAL1 NM_001014380; NM_032116 TSS200; 5′UTR Island
cg04672769 0.00000 0.01712 0.10358 0.08340 0.02017 HARS NM_002109; NM_012208; NM_002109 5′UTR; TSS200; 1stExon Island
cg04699668 0.00000 0.02654 0.78765 0.83452 −0.04687 N_Shore
cg04781764 0.00000 0.01704 0.86144 0.88530 −0.02387 WDR51B NM_172240 Body
cg04787602 0.00000 0.02085 0.16300 0.14423 0.01876 C1orf183; C1orf183 NM_198926; NM_019099 Body; TSS1500 Island
cg04851352 0.00001 0.04156 0.32402 0.30766 0.01637 Island
cg04981696 0.00000 0.01712 0.55926 0.49197 0.06730 ABCC1 NM_019862; NM_019898; NM_019899; NM_004996; NM_019900 Body S_Shore
cg05020775 0.00001 0.03145 0.11804 0.09411 0.02393 SNPH NM_014723 TSS200 Island
cg05102190 0.00000 0.01712 0.30075 0.26154 0.03922 ZYX NM_003461; NM_001010972 TSS200 Island
cg05131957 0.00000 0.02625 0.08817 0.06755 0.02062 CRLS1; CRLS1 NM_019095; NM_019095; NM_001127458 1st Exon; 5′UTR; TSS1500 Island
cg05209527 0.00001 0.03018 0.20213 0.15172 0.05042 SLC5A6 NR_028323; NM_080592; NM_021095; NM_016085; NM_001170795 TSS1500; Body; 5′UTR S_Shore
cg05377161 0.00001 0.04888 0.11639 0.09404 0.02235 Island
cg05629721 0.00000 0.02654 0.29331 0.24457 0.04875 PSMB8 NM_004159; NM_148919; NM_004159 5′UTR; TSS1500; 1st Exon S_Shore
cg05977109 0.00000 0.02085 0.09199 0.06838 0.02361 SGMS1 NM_147156 5′UTR Island
cg06276429 0.00001 0.04156 0.21157 0.17132 0.04025 SLC39A7; RXRB NM_006979; NM_021976; NM_001077516 TSS1500; Body N_Shore
cg07067659 0.00001 0.03187 0.03402 0.02441 0.00961 SLC7A5 NM_003486 1st Exon Island
cg07112456 0.00001 0.03536 0.93287 0.91243 0.02044 LRWD1 NM_152892 Body S_Shelf
cg07953400 0.00001 0.02968 0.05508 0.04526 0.00982 PIGQ NM_004204; NM_148920 TSS1500 N_Shore
cg07956264 0.00000 0.00228 0.06267 0.04264 0.02003 GPATCH3 NM_022078 1st Exon Island
cg08180934 0.00000 0.02625 0.05768 0.04568 0.01200 STRAP NM_007178 TSS200 Island
cg08276889 0.00000 0.02375 0.03778 0.02814 0.00964 LOC100133985 NR_024444 Body Island
cg08730728 0.00001 0.04156 0.10524 0.07919 0.02606 Island
cg09090048 0.00001 0.03018 0.21230 0.18139 0.03091 VPS26B; NCAPD3 NM_052875; NM_015261 TSS1500; Body Island
cg09267087 0.00001 0.04156 0.67624 0.64183 0.03441
cg09367046 0.00001 0.04262 0.07982 0.05797 0.02184 ANGEL1 NM_015305 TSS200 Island
cg09457469 0.00000 0.01698 0.06248 0.04671 0.01577 YBX2 NM_015982 Body Island
cg09826692 0.00000 0.02375 0.69472 0.71745 −0.02273 Island
cg10059171 0.00001 0.03187 0.07502 0.05829 0.01674 GPR89B NM_016334; NM_016334 5′UTR; 1st Exon Island
cg10178228 0.00000 0.00820 0.17082 0.11116 0.05966 FRMD4B NM_015123 TSS200 S_Shore
cg10369688 0.00001 0.03018 0.15684 0.13906 0.01778 ZFP36 NM_003407 Body Island
cg10381071 0.00000 0.01712 0.15437 0.20650 −0.05213 TLE3 NM_020908; NM_001105192; NM_005078 TSS1500 Island
cg10576516 0.00000 0.00019 0.05003 0.03414 0.01589 RECQL5; SAP30BP NM_001003716; NM_013260; NM_001003715; NM_013260; NM_004259 TSS200; 1st Exon; 5′UTR Island
cg10965669 0.00001 0.02931 0.80870 0.82408 −0.01538 AXIN2 NM_004655 Body Island
cg11319362 0.00001 0.04251 0.08666 0.06828 0.01838 ARL6IP5 NM_006407; NM_006407 1st Exon; 5′UTR Island
cg11542063 0.00000 0.02625 0.05513 0.03884 0.01629 NFE2L2 NM_006164; NM_006164; NM_001145413; NM_001145412 5′UTR; 1st Exon; TSS1500 Island
cg11866422 0.00000 0.02654 0.06337 0.05160 0.01177 Island
cg12289509 0.00001 0.04442 0.12657 0.11630 0.01027 TUBE1; C6orf225 NM_016262; NM_001033564 Body; TSS200 Island
cg12362980 0.00000 0.00307 0.88730 0.91537 −0.02807 Island
cg12407666 0.00000 0.02901 0.12378 0.10250 0.02128 RIC8B NM_018157 TSS1500 Island
cg12810189 0.00001 0.03920 0.04387 0.03696 0.00691 BCAP29 NR_027830; NM_018844; NM_018844; NM_001008405 Body; 1st Exon; 5′UTR; TSS1500 Island
cg12850793 0.00000 0.02321 0.15979 0.14310 0.01669 DENND5A NM_015213 TSS200 Island
cg13110034 0.00001 0.03187 0.07293 0.06148 0.01145 ANKRD34A; POLR3GL NM_001039888; NM_032305 TSS1500; 5′UTR Island
cg13199615 0.00001 0.03018 0.23755 0.21115 0.02640 KRTCAP2; TRIM46 NM_173852; NM_025058 TSS1500; Body N_Shore
cg13398864 0.00000 0.02433 0.11061 0.08598 0.02463 SEC22A NM_012430 TSS200 N_Shore
cg13485756 0.00000 0.02698 0.09370 0.08224 0.01146 RB1 NM_000321 TSS200 Island
cg14022530 0.00000 0.02698 0.07371 0.05385 0.01986 SASS6; CCDC76 NM_194292; NM_019083 TSS200 Island
cg14214745 0.00000 0.01698 0.03114 0.02396 0.00718 CRELD1 NM_001077415; NM_001031717; NM_015513; NM_015513; NM_001077415; NM_001031717 1st Exon; 5′UTR Island
cg14247318 0.00001 0.03018 0.06991 0.05126 0.01865 S_Shore
cg15043926 0.00000 0.02698 0.28089 0.26430 0.01659 STIM2 NM_001169117; NM_020860; NM_001169118 Body Island
cg15226170 0.00000 0.02879 0.37491 0.31659 0.05832 PMM1 NM_002676 TSS1500 S_Shore
cg15324256 0.00000 0.02625 0.05617 0.04062 0.01555 QTRTD1; KIAA1407 NM_024638; NM_020817 TSS1500; 1st Exon Island
cg15324448 0.00000 0.02625 0.10020 0.08001 0.02019 ZNF643 NM_023070 TSS200 Island
cg15536552 0.07584 0.04796 0.20583 0.34740 −0.01416 ACSL4 NM_022977; NM_004458 5′UTR; 5′UTR N_Shore
cg15572086 0.00000 0.01698 0.06120 0.04806 0.01314 C1orf203 NR_027645; NR_024126; NR_024124; NR_027646; NR_024125 TSS1500 Island
cg15653194 0.00000 0.00394 0.07660 0.05163 0.02496 LFNG NM_001166355; NM_002304; NM_001040168; NM_001040167 Body; TSS200 Island
cg16007711 0.00000 0.01712 0.11104 0.08414 0.02689 RHOBTB2 NM_001160036; NM_001160037; NM_015178 Body; 5′UTR S_Shore
cg16306148 0.00001 0.03359 0.01234 0.00608 0.00626 YBX1 NM_004559 TSS1500 Island
cg16357287 0.00000 0.00228 0.03588 0.02229 0.01360 SEH1L; SEH1L NM_001013437; NM_031216 TSS1500 N_Shore
cg16398128 0.00000 0.00000 0.04360 0.02550 0.01810 ZNF622 NM_033414; NM_033414 5′UTR; 1st Exon Island
cg16416718 0.00000 0.02879 0.16998 0.15554 0.01445 CAMTA1 NM_015215 TSS1500 Island
cg16743070 0.00000 0.01721 0.04222 0.02640 0.01582 MYST3 NM_001099413; NM_001099412; NM_006766 5′UTR Island
cg16803522 0.00000 0.01441 0.03705 0.02603 0.01102 RASGRP1 NM_001128602; NM_005739 TSS1500 Island
cg17074213 0.00001 0.02901 0.20986 0.15861 0.05125 TGFBR3 NM_003243; NM_003243 1st Exon; 5′UTR Island
cg17162475 0.00000 0.02375 0.13817 0.12031 0.01786 C6orf150 NM_138441 TSS200 Island
cg17168242 0.00000 0.01599 0.09273 0.08238 0.01035 OTUD7B NM_020205 TSS200 Island
cg17176517 0.00001 0.04039 0.05653 0.04319 0.01334 SNX4 NM_003794; NM_003794 5′UTR; 1st Exon Island
cg17427781 0.00001 0.04227 0.08943 0.07059 0.01884 DDX20; C1orf183 NM_007204; NM_198926 TSS200; Body Island
cg18676790 0.00001 0.03018 0.27930 0.34935 −0.07005
cg18848688 0.00001 0.02968 0.14296 0.32549 −0.18253 LIFR NM_001127671; NM_002310 TSS1500; 5′UTR Island
cg19050851 0.00000 0.02690 0.03973 0.02876 0.01097 ARSB NM_000046; NM_198709 Body; Body Island
cg19137662 0.00000 0.01441 0.04705 0.03249 0.01455 NOP56 NM_006392; NR_031699; NR_027700; NR_003078 Body; TSS200; TSS1500 Island
cg19362196 0.00000 0.02625 0.70650 0.76251 −0.05601 STMN1 NM_005563; NM_203399; NM_203401; NM_001145454 TSS1500 Island
cg19520115 0.00000 0.00160 0.12095 0.10488 0.01607 CAPZB NM_004930 Body Island
cg19634213 0.00000 0.01712 0.05716 0.04074 0.01643 PTEN; KILLIN NM_000314; NM_001126049 TSS1500; 1st Exon Island
cg19693031 0.00001 0.03187 0.80756 0.85146 −0.04390 TXNIP NM_006472 3′UTR
cg19878987 0.00000 0.02280 0.10362 0.08020 0.02342 LDHB NM_002300 TSS1500 S_Shore
cg20656751 0.00000 0.02625 0.51357 0.47261 0.04096 NAT8L NM_178557 1stExon Island
cg21012729 0.00001 0.03763 0.08208 0.06527 0.01681 NIN NM_182946; NM_020921; NM_182944 5′UTR Island
cg21373806 0.00001 0.04156 0.83546 0.86386 −0.02840 BAHCC1 NM_001080519 Body N_Shore
cg21786114 0.00001 0.03187 0.51357 0.46076 0.05281 EHMT2 NM_006709; NM_025256 TSS1500 N_Shore
cg22185268 0.00000 0.00217 0.02871 0.02008 0.00864 COMMD4 NM_017828 TSS200 Island
cg22721468 0.00000 0.00228 0.06494 0.04424 0.02070 SH3BP5L NM_030645 TSS1500 Island
cg22746421 0.00000 0.01712 0.87645 0.85266 0.02379
cg22902478 0.00001 0.04156 0.10027 0.08525 0.01502 LOC100130987 NR_024469 TSS200 Island
cg23224405 0.00000 0.00011 0.06783 0.04502 0.02281 DUSP16 NM_030640; NM_030640 1st Exon; 5′UTR Island
cg23348158 0.00000 0.01712 0.09342 0.06174 0.03168 FUZ NM_025129 TSS200 S_Shore
cg23512165 0.00000 0.02085 0.02886 0.02041 0.00845 MTMR4 NM_004687; NM_004687 1st Exon; 5′UTR Island
cg24108286 0.00001 0.03145 0.25285 0.21178 0.04107 TFDP1 NR_026580; NM_007111 TSS1500
cg24689754 0.00000 0.02433 0.03045 0.02020 0.01026 C19orf62 NM_001033549; NM_001033549; NM_014173; NM_014173 5′UTR; 1st Exon
cg24728479 0.00001 0.03187 0.19258 0.17546 0.01712 ZNF252; C8orf77 NR_023392; NR_026974 TSS1500; Body Island
cg25053907 0.00001 0.02968 0.06377 0.05198 0.01179 ZNF721; PIGG NM_133474; NM_017733; NM_001127178; NM_133474 5′UTR; TSS200; 1st Exon Island
cg25295726 0.00000 0.01101 0.18162 0.16283 0.01879 FUT11 NM_173540 TSS200 Island
cg25678532 0.00000 0.02625 0.05138 0.03889 0.01249 RBBP8 NM_203291; NM_203292; NM_002894 TSS1500; TSS200 Island
cg25818813 0.00000 0.02014 0.06671 0.05009 0.01661 MERTK NM_006343 Body Island
cg25856120 0.00001 0.04680 0.11157 0.08244 0.02914 ATP5G1 NM_005175; NM_005175; NM_001002027 1st Exon; 5′UTR S_Shore
cg25989057 0.00001 0.02942 0.03813 0.02660 0.01154 AIP NM_003977 TSS200 Island
cg26309655 0.00001 0.04156 0.17136 0.14822 0.02314 TARS2 NM_025150 TSS200
cg26462136 0.00001 0.03647 0.08411 0.06628 0.01783 ATXN7L3 NM_001098833; NM_020218 TSS1500 Island
cg26791384 0.00001 0.04156 0.25191 0.21622 0.03569 SYCE1L NM_001129979 Body Island
cg26824705 0.00001 0.04888 0.08142 0.06402 0.01740 MUL1 NM_024544 TSS200 Island
cg27164612 0.00000 0.02654 0.01342 0.00813 0.00529
cg27612695 0.00000 0.02625 0.18852 0.15615 0.03238 SUZ12P NR_024187 Body S_Shore