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. Author manuscript; available in PMC: 2019 Nov 1.
Published in final edited form as: J Neurol Neurosurg Psychiatry. 2018 Apr 19;89(11):1152–1162. doi: 10.1136/jnnp-2017-317741

TABLE 2.

TAG-SNP GENOTYPE FREQUENCIES IN THE SEVERE TBI POPULATION

SNP
Details
Variable Measured Homozygous
Wild-Type
Heterozygous Homozygous Variant p-value
(ANOVA
/Fisher)

rs7105832 (Intron 3) Wild-type A Variant C SNP Frequency in sTBI population (%) 160 (42.9%) 171 (45.8%) 42 (11.3%)
  • Average ICP, Mean (SD) 10 ± 3 mmHg 10 ± 4 mmHg 13 ± 7.5 mmHg 0.003*
  • Peak ICP, Mean (SD) 28.8 ± 17 mmHg 24.2 ± 10.3 mmHg 31.9 ± 19 mmHg 0.020*
  • Acute CT Edema, Y frequency (%) 68/150 (45.3%) 57/155 (36.8%) 25/40 (62.5%) 0.012*
  • Favorable GOS ≥ 4, Y frequency (%) 53/160 (33.1%) 53/171 (31%) 9/42 (21.4%) 0.358

rs2237982 (Intron 10) Wild-type C Variant T SNP Frequency in sTBI population (%) 133 (33.17%) 192 (47.88%) 76 (18.95%)
  • Average ICP, Mean (SD) 9.9 ± 2.9 mmHg 10.3 ± 3.8 mmHg 12.4 ± 7.8 mmHg 0.0107*
  • Peak ICP, Mean (SD) 29.2 ± 17.5 mmHg 24.8 ± 11 mmHg 31.6 ± 18.3 mmHg 0.0190*
  • Acute CT Edema, Y frequency (%) 54/120 (45%) 66/176 (37.5%) 38/67 (56.7%) 0.0204*
  • Favorable GOS ≥ 4, Y frequency (%) 43/133 (32.3%) 66/192 (34.4%) 13/76 (17.1%) 0.015*

rs11024286 (Intron 10) Wild-type G Variant A SNP Frequency in sTBI population (%) 187 (47.10%) 160 (40.3%) 50 (12.59%)
  • Average ICP, Mean (SD) 11.2 ± 5.9 mmHg 10.2 ± 3.7 mmHg 9.8 ± 2.9 mmHg 0.2207
  • Peak ICP, Mean (SD) 28.6 ± 15.2 mmHg 26.9 ± 14.7 mmHg 26 ± 17.5 mmHg 0.6108
  • Acute CT Edema, Y frequency (%) 74/169 (43.8%) 64/147 (43.6%) 19/44 (43.2%) 1.0
  • Favorable GOS ≥ 4, Y frequency (%) 44/187 (23.5%) 60/160 (37.5%) 16/50 (32%) 0.017*

rs4148622 (Intron 15) Wild-type G Variant A SNP Frequency in sTBI population (%) 224 (55.86%) 141 (35.16%) 36 (8.98%)
  • Average ICP, Mean (SD) 10.6 ± 4.6 mmHg 10.8 ± 5.5 mmHg 9.9 ± 3.5 mmHg 0.7402
  • Peak ICP, Mean (SD) 26.7 ± 13.1 mmHg 29.4 ± 19.1 mmHg 24.7 ± 9.7 mmHg 0.3162
  • Acute CT Edema, Y frequency (%) 90/206 (43.7%) 59/129 (45.8%) 10/28 (35.7%) 0.636
  • Favorable GOS ≥ 4, Y frequency (%) 70/224 (31.3%) 35/141 (24.82%) 18/36 (50%) 0.016*