. 2018 Oct 11;8:15164. doi: 10.1038/s41598-018-33327-9

Table 1.

Candidate QTL regions and single SNPs detected for methane production with Bayesian Factor (BF) above 30, their position in base pairs, minor allele frequency (MAF), number of candidate genes and percentage of total genetic variance explained by them.

BTA	SNP name	Position (bp)	MAF	BF	Candidate QTL	Allele subs. effect^a	Number of candidate genes	Total genetic var. expl. (%)
1	BTA89822nors	46223040	0.491	14.33	Yes	0.113	12	0.006
1	BTA89820nors	46321775	0.488	12.26	Yes	0.193	12	0.006
4	Hapmap39581BTA70101	9203380	0.497	12.26	Yes	0.226	14	0.003
4	ARSBFGLNGS109843	9615916	0.430	14.33	Yes	0.251	14	0.003
9	BTB00395654	60102040	0.353	32.29	—	0.132	1	0.003
9	ARSBFGLNGS36482	64262480	0.365	16.41	Yes	0.201	9	0.005
9	BTB01673493	64291804	0.365	16.41	Yes	0.172	9	0.005
9	Hapmap42513BTA33276	66997852	0.215	23.76	Yes	0.183	7	0.005
9	Hapmap27624BTA154889	67122449	0.318	13.29	Yes	0.158	7	0.005
13	BPI1	67833218	0.402	11.22	Yes	0.144	21	0.003
13	ARSBFGLNGS103635	67888763	0.467	48.68	Yes	0.152	21	0.003
20	ARSBFGLNGS109784	909076	0.407	36.61	—	0.129	1	0.003
25	ARSBFGLNGS61709	1086505	0.432	17.45	Yes	0.277	65	0.004
25	ARSBFGLNGS103099	1127441	0.395	15.37		0.238
25	ARSBFGLBAC43143	1184038	0.395	24.82		0.101
25	Hapmap29768BTC016149	1205232	0.346	16.41		0.321

^aAllele substitution effects were estimated as $α = \sqrt{σ_{a}^{2} {(2 p q)}^{- 1}}$ , where $σ_{a}^{2}$ is the genetic variance explained by the SNP, and p and q are the frequencies of the two alleles⁷⁶.