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. 2018 Sep 4;(39):1–27. doi: 10.3897/mycokeys.39.27014

Table 2.

The information of references sequences used for phylogenetic analyses in this study.

Species Strain No. Host/insect Country Genbank No. Reference
ITS β-tubulin
Sporothrix abietina CBS125.89 Abies vejari Mexico AF484453 KX590755 de Beer et al. 2003
S. aurorae CMW19362 Pinus eliottii South Africa DQ396796 DQ396800 Francois et al. 2006
S. bragantina CBS 474.91 Soil Brazil FN546965 FN547387 Madrid et al. 2010
CBS 430.92 Soil Brazil FN546964 FN547386 Madrid et al. 2010
S. brasiliensis Ss383 Felis catus Brazil KP890194 FN547387 Araujo et al. 2015
S. brunneoviolacea CBS 124562 Soil Spain FN546959 FN547385 Madrid et al. 2010
CBS 124564 Soil Spain FN546958 FN547384 Madrid et al. 2010
S. dentifunda CMW13016 Quercus wood Hungary AY495434 AY495445 Aghayeva et al. 2005
CMW13017 Quercus wood Poland AY495435 AY495446 Aghayeva et al. 2005
S. epigloea CBS 573.63 Tremella fusiformis Argentina KX590817 KX590760 de Beer et al. 2016
S. eucalyptigena CPC 24638 Eucalyptus marginata Western Australia KR476721 N/A Crous et al. 2015
S. gemella CMW23057 Protea caffra South Africa DQ821560 DQ821554 Roets et al. 2008
S. inflata CMW12529 Soil Canada AY495428 AY495438 Aghayeva et al. 2005
CMW12527 wheat-field soil Germany AY495426 AY495437 Aghayeva et al. 2005
S. nebularis CMW27319 Orthotomicus erosus Spain DQ674375 N/A Romón et al. 1900
CMW27900 O. erosus Spain DQ674376 N/A Romón et al. 1900
S. pallida CBS131.56 Stemonitis fusca Japan EF127880 EF139110 de Meyer et al. 2008
CBS150.87 S. fusca Japan EF127879 EF139109 de Meyer et al. 2008
S. palmiculminata CMW23049 Protea repens South Africa DQ316191 DQ821543 Francois et al. 2006
S. phasma CMW20676 P. laurifolia South Africa DQ316219 DQ821541 Francois et al. 2006
S. proteara CMW1103 P. caffra South Africa DQ316203 DQ316165 Francois et al. 2006
S. schenckii MITS2474 N/A Mexico KP132783 N/A Irinyi et al. 2015
CBS 938.72 Human Franch KP017094 N/A Irinyi et al. 2015
S. fusiforis CMW9968 Populus nigra Azerbaijan AY280481 AY280461 Aghayeva et al. 2004
S. lunata CMW10563 Carpinus betulus Austria AY280485 AY280466 Zhou et al. 2006
S. narcissi CBS138.50 N/A Canada AY194510 KX590765 Jacobs et al. 2003
S. splendens CMW872 Protea repens South Africa DQ316215 DQ316177 Francois et al. 2006
S. stenoceras CMW2524 Acacia mearnsii South Africa AF484459 AY280473 de Beer et al. 2003
CBS237.32 pine pulp Norway AF484462 N/A de Beer et al. 2003
S. thermara CMW38930 Euphorbia ingens South Africa KR051115 KR051103 Ja et al. 2016
CMW38929 E. ingens South Africa KR051114 KR051102 Ja et al. 2016
S. stylites CMW14543 Pine utility poles Australia EF127883 EF139096 de Meyer et al. 2008
Ophiostoma adjuncti CMW135 Pinus ponderosa USA AY546696 N/A Zhou et al. 2004
O. allantosporum CBS185.86 P. pinaster Europe AY934506 N/A Villarreal et al. 2005
O. angusticollis Zoq16 N/A N/A EU109671 N/A de Beer et al. 2016
CBS186.86 Pinus banksiana USA AY924383 KX590757 Villarreal et al. 2005
O. bicolor CBS492.77 Piceaglauca/Ips sp. USA DQ268604 DQ268635 Massoumi et al. 2007
O. candidum CMW26484 Eucalyptus cloeziana South Africa HM051409 HM041874 Nkuekam et al. 2012
CMW26483 E. cloeziana South Africa HM051408 HM041873 Nkuekam et al. 2012
O. catonianum C1084 Pyrus Italy AF198243 N/A Gorton et al. 2004
O. coronatum CBS 497.77 Pinus pinaster Iberian Peninsula AY924385 KX590758 Villarreal et al. 2005
O. cupulatum C1194 Pseudotsuga USA AF198230 N/A Uzunovic et al. 2000
O. deltoideosporum WIN(M)41 N/A N/A EU879121 N/A Mullineux and Hausner 2009
O. fasciatum UM56 Pseudotsuga menziesii CanadaCanada EU913720 EU913759 Plattner et al. 2009
O. floccosum C01-021 Girdled Picearubens Canada AY194504 N/A Jacobs et al. 2003
C1086 Soil Sweden AF198231 N/A Gorton et al. 2004
O. fumeum CMW26813 Eucalyptus cloeziana South Africa HM051412 HM041878 Nkuekam et al. 2012
CMW26818 E. cloeziana South Africa HM051415 HM041877 Nkuekam et al. 2012
O. fuscum CMW23196 Picea abies Finland HM031504 HM031563 Linnakoski et al. 2010
O. himai ulmi C1183 Ulmus India AF198233 N/A Harrington et al. 2001
C1306 Ulmus India AF198234 N/A Harrington et al. 2001
O. ips CMW7075 N/A USA AY546704 N/A Zhou et al. 2004
CMW22843 Orthotomicus erosus N/A DQ539549 N/A Romón et al. 2007
O. japonicum YCC099 N/A N/A GU134169 N/A Yamaoka et al. 2009
O. kryptum DAOM 229701 Piceaabies/Tetropium sp. Austria AY304436 AY305685 Jacobs and Kirisits 2013
DAOM 229702 Larixdecidua/T.gabrieli Austria AY304434 AY305686 Jacobs and Kirisits 2013
K6/3/2 Piceaabies/Tetropium sp. Austria AY304428 AY305687 Jacobs and Kirisits 2013
O. minus PIR 18S N/A N/A AY934509 N/A Villarreal et al. 2005
CMW22802 Dryocoetes autographus N/A DQ539507 N/A Romón et al. 2005
RJ-T144 Tetropium sp. Poland AM943886 N/A Jankowiak and KolařÍk 2010
CMW28117 Piceaabies/Tomicusminor Russia HM031497 HM031535 Linnakoski et al. 2010
AU58.4 Lodgepole pine Canada AF234834 N/A Gorton et al. 2004
DAOM 212686 N/A Canada AY304438 AY305690 Jacobs and Kirisits 2013
O. micans CMW:38903 Picea crassifolia China KU184432 KU184303 Yin et al. 2016
O. montium CMW13221 Pinusponderosa/ Dendroctonusponderosae USA AY546711 N/A Zhou et al. 2004
CMW13222 P.contorta/D.ponderosae Canada AY546712 N/A Zhou et al. 2004
O. nigrocarpum CMW 560 Abies sp. USA AY280489 AY280479 Aghayeva et al. 2004
CMW651 Pseudotsuga menziesii USA AY280490 AY280480 Aghayeva et al. 2004
O. nitidum CMW:38907 Picea crassifolia China KU184437 KU184308 Yin et al. 2016
O. novo ulmi C1185 Ulmus Russia AF198235 N/A Harrington et al. 2001
C510 Ulmus USA AF198236 N/A Harrington et al. 2001
O. olgensis CXY1404 Larixgmelini/Ipssubelongatus China KU551299 KU882938 Wang et al. 2016
CXY1405 L.gmelini/I.subelongatus China KU551300 KU882939 Wang et al. 2016
CXY1410 L.gmelini/I.subelongatus China KU551303 KU882942 Wang et al. 2016
O. pallidulum CMW23279 Pinussylvestris/Hylastesbrunneus Finland HM031509 N/A Linnakoski et al. 2010
CMW23278 P.sylvestris/ H.brunneus Finland HM031510 HM031566 Linnakoski et al. 2010
O. piceae C1087 N/A Germany AF198226 N/A Uzunovic et al. 2000
C1246 Pseudotsuga USA AF198227 N/A Uzunovic et al. 2000
O. pseudotsugae 92-634/302/6 Pinusmenziesii/Dendroctonusfrontalis Canada AY542502 AY548744 Gorton et al. 2004
D48/3 N/A Canada AY542501 AY542511 Gorton et al. 2004
O. proteasedis CMW 28601 Protea caffra Zambia EU660449 EU660464 Roets et al. 2009
O. pulvinisporum CMW9022 Pinuspseudostrobus/Dendroctonusmexicanus Mexico AY546714 DQ296100 Zhou et al. 2004
O. qinghaiense CMW:38902 Picea crassifolia China KU184445 KU184316 Yin et al. 2016
O. querci C970 Quercus United Kingdom AF198239 N/A Gorton et al. 2004
C969 Quercus United Kingdom AF198238 N/A Gorton et al. 2004
C1085 Fagus Germany AF198237 N/A Gorton et al. 2004
O. rostrocoronatum CBS434.77 Woodpulp USA AY194509 KX590771 Jacobs et al. 2003
O. saponiodorum CMW29497 Piceaabies/Ipstypographus Finland HM031507 HM031571 Linnakoski et al. 2010
CMW28135 P. abies Russia HM031508 N/A Linnakoski et al. 2010
O. sejunctum Ophi 1B N/A N/A AY934520 N/A Villarreal et al. 2005
Ophi 1A N/A N/A AY934519 N/A Villarreal et al. 2005
O. setosum AU160-38 Pseutotsugae menziesii North America AF128929 N/A Uzunovic et al. 2000
CMW12378 Tsuga sp. China FJ430485 FJ430515 Grobbelaar et al. 2009
O. tenellum CBS189.86 Pinus banksiana USA AY934523 KX590772 Villarreal et al. 2005
O. tetropii C00-027a Tetropium fuscum Canada AY194482 NA Jacobs et al. 2003
C00-003 T. fuscum Canada AY194485 AY305701 Jacobs et al. 2003
O. ulmi C1182 Ulmus Netherlands AF198232 N/A Harrington et al. 2001
Graphilbum crescericum CMW 22829 Hylastes ater Spain DQ539535 N/A Romón et al. 2007
Gra. fragrans C1224 Pinus sylvestris Sweden AF198248 N/A Harrington et al. 2001
Gra. microcarpum YCC612 Japanese larch logs Japan GU134170 N/A Yamaoka et al. 2009
Gra. rectangulosporium MAFF 238951 N/A Japan AB242825 N/A Ohtaka et al. 2006
Raffaelea canadensis CBS 168.66 N/A N/A GQ225699 N/A Kyunghee et al. 2009
Leptographium lundbergii DAOM 64746 N/A N/A EU879151 AY534943 Mullineux and Hausner 2009
L. truncatum WIN(M)1435 Pinus taeda South Africa AY935626 N/A Hausner et al. 2005

ITS = internal transcribed spacer regions 1 and 2 of the nuclear ribosomal DNA operon, including the 5.8S region; tub2 = beta-tubulin;

N/A= represents information that are not available.

CMW = Culture Collection of the Forestry and Agricultural Biotechnology Institute; CBS = The culture collection of Westerdijk Fungal Biodiversity Institute, Utrecht, the Netherlands; MAFF = Ministry of Agriculture, Forestry, and Fisheries, Genetic Resource Centre, Culture Collection of National Institute of Agrobiological Resources, Japan; CXY (Culture Xingyao): Culture collection of the Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry.