Table 2.
SNPs investigated
| Chr | Gene | No. of SNPs; valid (total) | SNPs |
|---|---|---|---|
| 1 | PLA2G4A | 5 (6) | rs10489407, rs6695515, rs10798069, rs10737276, rs12144159, rs7414079 |
| 2 | CREB1 | 2 (4) | rs889895, rs6740584, rs2551922, rs2254137 |
| 3 | CHL1 | 8 (10) | rs1516338, rs1516340, rs4003413, rs17271940, rs17274531, rs9990005, rs331893, rs2272522, rs13078884, rs9841789 |
| 3 | GSK3B | 4 (5) | rs2037547, rs2873950, rs1719895, rs6782799, rs1381841 |
| 5 | HOMER1 | 8 (8) | rs3822568, rs6872497, rs4455546, rs12657371, rs12514775, rs6893883, rs4132033, rs10042665 |
| 7 | SP4 | 5 (5) | rs2282888, rs2237304, rs10272006, rs12673091, rs9648275 |
| 7 | NCAPG2 | 4 (4) | rs10772, rs877279, rs12113120, rs4621754 |
| 7 | NCAPG2-ESYT2a | 2 (3) | rs12668837, rs9801117, rs6459896 |
| 7 | ESYT2 | 6 (6) | rs2013, rs3763406, rs3816462, rs2788469, rs842446, rs13233513 |
| 7 | ESYT2-WDR60a | 2 (2) | rs1039621, rs2657375 |
| 7 | WDR60 | 6 (6) | rs2657323, rs1188974, rs2788478, rs10275341, rs2527204, rs2657340 |
| 7 | VIPR2 | 2 (2) | rs3793222, rs2270313 |
| 8 | PPP3CC | 4 (4) | rs1522248, rs10108011, rs7430, rs2249098 |
| 9 | SIGMAR1 | 1 (2) | rs12115673, rs10814130 |
| 11 | BDNF | 7 (7) | rs1519480, rs7124442, rs6265, rs11030101, rs11030102, rs11030104, rs12273363 |
| 13 | HTR2A | 11 (12) | rs7323441, rs6314, rs7997012, rs1923886, rs643627, rs2224721, rs582385, rs17288723, rs2296973, rs6313, rs6311, rs1328685 |
| 15 | RORA | 26 (27) | rs10438338, rs7167685, rs1657792, rs8040067, rs11630262, rs339996, rs9806453, rs2553235, rs1020729, rs1871858, rs12900122, rs17204440, rs12913922, rs341382, rs1673319, rs8041466, rs1234805, rs12148149, rs11071570, rs4775340, rs2414687, rs7178442, rs1403737, rs17270745, rs809736, rs7177611, rs10519113 |
| 15 | ST8SIA2 | 11 (12) | rs3759917, rs2305561, rs3784723, rs3784722, rs4777989, rs11629679, rs7168443, rs2290492, rs8035760, rs11853992, rs17522085, rs2279447 |
| 21 | S100B | 7 (8) | rs9983498, rs2839350, rs9722, rs2186358, rs2839364, rs2839365, rs3788266, rs2839366 |
| 22 | TXNRD2 | 2 (2) | rs4646310, rs2020917 |
| 22 | COMT | 6 (6) | rs933271, rs5993883, rs740603, rs2239393, rs4680, rs174696 |
All the SNPs genotyped in the Korean sample are reported in this table. Valid SNPs are shown in bold; those that were excluded from the analyses in italics (for details see “Methods” section)
aSNPs in these rows were located between two genes and, according to NCBI SNP database (https://www.ncbi.nlm.nih.gov/snp/), may affect both