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. 2018 Oct 12;8:15183. doi: 10.1038/s41598-018-33636-z

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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TDRM RT sequences ML phylogenetic tree of HIV-1 Manipur sequences and 52 highly similar (nucleotide similarity >94%) sequences from other countries selected with Blastn analyses. Sample Manipur005_RT (a), sample Manipur017_RT (b), sample Manipur021_RT (c), sample Manipur034_RT (d) and sample Manipur056_RT (e). Manipur sequences are shown in highlighted red color. The tree was rooted using reference subtype sequences. The numbers along branches correspond to aLRT values. Bar is in nucleotide substitutions per site. The pie chart shows the proportion of countries represented by the Blastn analysis. Countries correspond with defined colors which are specified in each pie chart.