Fig. 7.

Genome assembly, mapping of reads on virus genome, and mutation analyses for TRV and number of identified SNPs. Genome organization of two RNA fragments, RNA1 (a) and RNA2 (b), of TRV genome. Green boxes indicate information of assembled virus genome, such as SRA number, name of isolate, and genome size. The positions of identified SNPs in each virus genome were visualized by the Tablet program. Number of identified SNPs associated with identified viruses in each transcriptome (c) and total number of identified SNPs for each virus (d)