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(A) Effect of decreased cDNA library sequencing depth on the number of significant connections detected by connectivity mapping for Dataset_I and II gene signatures. (B) False discovery rate (FDR) of the number of significant connections detected in the connectivity mapping for Dataset_I and II gene signatures. Significant connections that potentially could progress (prog) or reverse (rev) the disease phenotype and FDRs are plotted against the data fraction included in the analysis (f).
