Table 1.
Gene transcript TaqMan Gene Expression Primer\Probes
| Genes | Assay ID | Reference Sequence |
Amplicon length |
|---|---|---|---|
| 18S ribosomal RNA (18s) | Mm04277571 | NR_003278 | 115 |
| heat shock protein 5 (GRP78) | Mm00517691 | NM_001163434 | 75 |
| eukaryotic translation initiation factor 2 alpha kinase 3 (PERK) | Mm00438700 | NM_010121 | 62 |
| endoplasmic reticulum (ER) to nucleus signaling 1 (IRE1α) | Mm00470233 | NM_023913 | 95 |
| activating transcription factor 6 (ATF6) | Mm01295319 | NM_001081304 | 74 |
| X-box binding protein 1 (XBP1) | Mm00457357 | NM_001271730 | 56 |
| DNA-damage inducible transcript 3 (CHOP) | Mm01135937 | NM_001290183 | 92 |
| intercellular adhesion molecule 1 (ICAM-1) | Mm01175876_g1 | NM_010493.2 | 94 |
| vascular cell adhesion molecule 1 (VCAM1) | Mm01320973_m1 | NM_011693.3 | 126 |
| integrin alpha M (Itgam) / CD11b | Mm01271262_m1 | NM_001082960.1 | 107 |
| chemokine (C-C motif) ligand 2 (CCL2) | Mm00441242_m1 | NM_011333.3 | 74 |
| laminin, alpha 5 (LAMA5) | Mm01222029_m1 | NM_001081171.2 | 64 |
| endothelin 2 (EDN2) | Mm00432983_m1 | NM_007902.2 | 74 |
| guanylate binding protein 2 (GBP2) | Mm00494576_g1 | NM_010260.1 | 77 |
| lectin, galactose binding, soluble 9 (LGALS9) | Mm00495295_m1 | NM_001159301.1 | 68 |
| tissue inhibitor of metalloproteinase 1 (TIMP1) | Mm01341361_m1 | NM_001044384.1 | 100 |
| cholesterol 25-hydroxylase (CH25H) | Mm00515486_s1 | NM_009890.1 | 126 |
| tumor necrosis factor alpha (TNF-α) | Mm00443258_m1 | NM_001278601.1 | 81 |
| tumor necrosis factor alpha receptor 1 (TNFR 1) | Mm00441883_g1 | NM_011609.4 | 82 |
| tumor necrosis factor alpha receptor 2 (TNFR 2)/Tnfrsf1b | Mm00441889_m1 | NM_011610.3 | 64 |