Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2018 Oct 8;11:363. doi: 10.3389/fnmol.2018.00363

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2018 Tripathy, Toker, Bomkamp, Mancarci, Belmadani and Pavlidis.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Cell type-specific contamination scores for patch-seq and dissociated cells. (A) Histogram of contamination scores of GABAergic elongated neurogliaform cells (eNGCs cells) from the Cadwell dataset (top) and analogous Ndnf cells from Tasic (middle) and Zeisel (bottom) dissociated-cell datasets. Contamination scores are specific to the expression of pyramidal cell type-specific marker genes. Dashed line at 0.5 indicates threshold used for calling single-cell contamination. (B) Same as (A), but for hippocampal GABAergic regular spiking interneurons (RS INT cells) characterized in Földy dataset (top) and Sncg cells from Tasic and Zeisel datasets. (C,D) Contamination scores, indicated by heatmap color bar on right, across multiple classes of broad cell types for Cadwell eNGC cells (C) and Földy regular spiking interneurons (D). Arrows denote same data shown in histograms in top panels of (A,B).