Table 3. Xp genes that meet criteria for being involved in BAV/TAD.
Gene | ensembl | cdsStart—cdsEnd* | X inactivation status | Pseudogene/ Y homolog | Aorta Expression (GTEx median RPKM) | Valve Development | Rank |
---|---|---|---|---|---|---|---|
TIMP1 | ENSG00000102265 | X:47442814–47446090 | Variable | No | 423.6 | Yes26 | 1 |
RBM3 | ENSG00000102317 | X:48433568–48435474 | Variable | No | 48.96 | unknown | 2 |
UBA1 | ENSG00000130985 | X:47058201–47074328 | Active | No | 41.44 | unknown | 3 |
INE2 | ENSG00000281371 | X:15805712–15805712 | Active | No | 12.36 | unknown | 4 |
AP1S2 | ENSG00000182287 | X:15845447–15870647 | Mostly Active | No | 8.701 | unknown | 5 |
GEMIN8 | ENSG00000046647 | X:14027031–14039597 | Mostly Active | No | 6.69 | unknown | 6 |
CA5B | ENSG00000169239 | X:15768146–15800787 | Variable | No | 5.198 | unknown | 7 |
NHS | ENSG00000188158 | X:17653686–17750584 | Mostly Active | No | 4.852 | unknown | 8 |
TRAPPC2 | ENSG00000196459 | X:13732525–13738082 | Mostly Active | No | 4.289 | unknown | 9 |
CA5BP1 | ENSG00000186312 | X:15721474–15721474 | Active | No | 3.813 | unknown | 10 |
CTPS2 | ENSG00000047230 | X:16608915–16721025 | Mostly Active | No | 3.593 | unknown | 11 |
INE1 | ENSG00000224975 | X:47065254–47065254 | Active | No | 2.09 | unknown | 12 |
TCEANC | ENSG00000176896 | X:13680627–13681683 | Mostly Active | No | 0.4852 | unknown | 13 |
PPEF1 | ENSG00000086717 | X:18725899–18845605 | Variable | No | 0.05353 | unknown | 14 |
GRPR | ENSG00000126010 | X:16142076–16170768 | Mostly Active | No | 0.02957 | unknown | 15 |
FAM9C | ENSG00000187268 | X:13056559–13061908 | Active | No | 0.005627 | unknown | 16 |
*Position on the X chromosome; cdsStart, start of coding sequence; cdsEnd, end of coding sequence, hg19