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. 2018 Oct 12;92(21):e00731-18. doi: 10.1128/JVI.00731-18

TABLE 1.

Primer sequences

Gene Primer sequence
Reference
Forward Reverse
GAPDH 5′-CCCCTTCATTGACCTCAACTACA-3′ 5′-CGCTCCTGGAGGATGGTGAT-3′ 55
Gag-Pol 5′-TTCTTCAGAGCAGACCAGAGC-3′ 5′-GCTGCCAAAGAGTGATCTGA-3′ 56
Tat-Rev (M669-LA23) 5′-GTGTGCCCGTCTGTTGTGTGACTCTGGTAAC-3′ 5′-GCCTATTCTGCTATGTGACACCC-3′ 57
Vif 5′-GGGAGCCACACAATGAATG-3′ 5′-CCAGGGCTCTAGTCTAGG ATC-3′ 58
Vpr 5′-ACTTACGGGGATACTTGGGCAG-3′ 5′-CTCCATTTCTTGCTCTCCTCTGTC-3′ 56
U5-Gag 5′-TGTGTGCCCGTCTGTTGTGTGA-3′ 5′-GAGTCCTGCGTCGAGAGAGCT-3′ 58
NF-κB p65 5′-TCTCATCCCATCTTTGACAATC-3′ 5′-TGAAATACACCTCAATGTCCTCTTTC-3′ 59
Sp1 5′-TTGAAAAAGGAGTTGGTGGC-3′ 5′-TGCTGGTTCTGTAAGTTGGG-3′ 60
Pre-GAPDH 5′-CCACCAACTGCTTAGCACC-3′ 5′-CTCCCCACCTTGAAAGGAAAT-3′ 61
HIV-1 LTR 5′-TGGAAAATCTCTAGCAGTGGC-3′ 5′-GAGTCCTGCGTCGAGAGATCT-3′ 62
ELK1 5′-CTGACCCCATCCCTGCTTCCTA-3′ 5′-GAAGTGAATGCTAGGAGGCAGCG-3′ 63
MAZ 5′-GCTTCTCCCGGCCGGAT-3′ 5′-GAAAGCTGCCTCACATTTCTCACATTTG-3′ 64