Table 1:
tmMBP1-MTT | apo tmMBP2 | tmMBP2-MTT | apo tmMBP3 | tmMBP3-MAL | |
---|---|---|---|---|---|
PDB ID | 6DTU | 6DTT | 6DTS | 6DTR | 6DTQ |
Data collection | |||||
Resolution range (Å) | 50.0 – 1.5 (1.55 – 1.50) |
30.0 – 1.9 (1.97 – 1.90) |
50.0 – 1.5 (1.54 – 1.50) |
40.0 – 2.3 (2.38 – 2.30) |
40.0 – 2.1 (2.23 – 2.15) |
Space group | P 1 | P 21 21 21 | P 1 | C 2 2 21 | P 21 21 21 |
Unit cell | |||||
a, b and c (Å) | 34.6, 55.4, 93.5 | 78.9, 91.0, 100.2 | 35.4, 56.1, 88.3 | 65.5, 137.4, 145.0 | 82.3, 124, 174.8 |
α, β, and γ (°) | 96.8, 93.6, 101.9 | 90.0, 90.0, 90.0 | 89.5, 84.6, 89.6 | 90.0, 90.0, 90.0 | 90.0, 90.0, 90.0 |
Unique reflections | 90224 | 55922 | 98262 | 27256 | 93556 |
Multiplicity* | 2.1 (2.1) | 3.0 (2.8) | 1.9 (1.9) | 2.4 (2.3) | 3.2 (2.9) |
Completeness (%) | 83.4 (83.3) | 97.1 (98.3) | 90.3 (85.4) | 92.5 (92.4) | 95.2 (88.5) |
R-merge | 0.077 (0.464) | 0.056 (0.472) | 0.036 (0.125) | 0.129 (0.641) | 0.086 (0.497) |
Mean I/σ(I) | 8.3 (3.0) | 16.8 (2.3) | 19.7 (7.1) | 7.6 (2.0) | 11.2 (2.1) |
Wilson B-factor | 16.99 | 26.62 | 18.53 | 40.09 | 28.14 |
Refinement | |||||
Reflections used in refinement | 90177 | 55874 | 98260 | 27237 | 93498 |
Reflections used for R-free | 1999 | 2000 | 1969 | 1363 | 4624 |
R-work | 0.205 (0.304) | 0.193 (0.280) | 0.169 (0.203) | 0.164 (0.283) | 0.174 (0.280) |
R-free | 0.227 (0.318) | 0.234 (0.331) | 0.191 (0.225) | 0.193 (0.319) | 0.205 (0.332) |
Number of non-hydrogen atoms in refinement | |||||
macromolecules | 5930 | 5854 | 5891 | 3145 | 12526 |
ligands | 90 | 0 | 90 | 5 | 96 |
solvent | 524 | 389 | 730 | 88 | 514 |
RMS Bond length (Å) | 0.007 | 0.006 | 0.013 | 0.004 | 0.002 |
RMS Bond angle (°) | 0.9 | 0.8 | 1.2 | 0.7 | 0.6 |
Ramachandran allowed (%) | 0.8 | 1.7 | 0.7 | 2.8 | 1.5 |
Ramachandran outliers (%) | 0.0 | 0.1 | 0.0 | 0.0 | 0.0 |
Ramachandran favored (%) | 99.2 | 98.2 | 99.3 | 97.2 | 98.5 |
Clashscore | 3.5 | 2.5 | 3.1 | 4.4 | 2.2 |
Average B-factor | 20 | 28 | 21 | 48 | 31 |
macromolecules | 20 | 28 | 21 | 48 | 31 |
ligands | 16 | N/A | 17 | 44 | 19 |
solvent | 26 | 33 | 29 | 46 | 33 |
Number in parentheses represent values in the highest resolution shell