Table 4.
Chromosomally-encoded genes in Streptomyces sp. strain 4F (isolate SGR-27-4-5%).
| Gene(s) of Interest | # of Genes Present** | Gene Size (bp)* | Accession Number |
|---|---|---|---|
| Mobile element protein (mobile element transfer protein SpdB) | 11 | 402 | WP_054100445 |
| Universal stress protein family | 4 | 906 | WP_019327273 |
| Osmoregulation | 3 | 477 | SBT92325 |
| Ectoine biosynthesis and regulation | 5 | 900 | WP_052841845.1 |
| Choline and betaine uptake and betaine biosynthesis | 10 | 666 | WP_020271580 |
| Heat shock protein (heat shock DnaK gene cluster, extended: hypothetical radical SAM family enzyme, coproporphyrinogen III oxidase, oxygen-independent, translation termination factors, bacterial: tmRNA-binding protein SmpB, heat shock protein 60 family chaperone GroEL, heat shock protein 60 family co-chaperone GroEL, chaperone protein DnaK, chaperone protein DnaJ, heat shock protein GrpE, heat-inducible transcription repressor HrcA) | 14 | 438 | WP_043376487 |
| Alkaline shock protein 23 | 3 | 498 | WP_037909982 |
| Cold shock protein (cold shock protein CspD, cold shock protein CspA, cold shock protein CspG) | 4 | 204 | WP_023586105 |
| Cobalt-zinc-cadmium resistance: transcriptional regulator, MerR family (cobalt-zinc-cadmium resistance protein CzcD, DNA-binding heavy metal response regulator, probable Co/Zn/Cd efflux system membrane fusion protein) | 7 | 1185 | WP_043381403 |
| Tellurium resistance protein (TerD, TerA) | 6 | 456 | WP_043371552 |
| Arsenic resistance: arsenical pump-driving ATPase (arsenical-resistance protein ACR3, arsenical resistance operon repressor, arsenate reductase) | 7 | 978 | WP_043371752 |
| Uptake of selenate and selenite: (various polyols ABC transporter, permease component 2, ATP-binding component 1) | 3 | 783 | WP_011030595 |
| Lantibiotic ABC transporter | 1 | 807 | CCQ18686 |
| Putative drug exporters of the RND superfamily | 3 | 1398 | WP_016327935 |
| Salicylate and gentisate catabolism, salicylate ester degradation: salicylate hydroxylase (EC 1.14.13.1) | 1 | 1716 | WP_016327418 |
| ABC-type multidrug transport system, permease component | 1 | 783 | WP_032757890 |
| Multidrug resistance protein B | 1 | 2097 | WP_055419087 |
| Tetracycline resistance, ribosome protection type, translation elongation factor G family (tetracycline resistance protein) | 2 | 2128 | WP_043381067 |
| Vancomycin response regulator VanR | 2 | 2808 | WP_043374748 |
| Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin | 1 | 1164 | WP_043377507 |
| Putative penicillin acylase (penicillin amidase family protein) | 2 | 2808 | WP_043374748 |
| Pyridoxin (vitamin B6) biosynthesis, thiamine biosynthesis: 1-deoxy-D-xylulose 5-phosphate synthase (pyridoxamine 5'-phosphate oxidase, pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-), CBSS-1806.1.peg.1285, pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) | 10 | 1929 | WP_046249165 |
| Folate biosynthesis: thymidylate synthase ThyX (EC 2.1.1.-) (dihydrofolate synthase, EC 6.3.2.12), folylpolyglutamate synthase (EC 6.3.2.17), folate biosynthesis cluster: FIG027937: secreted protein) | 3 | 741 | WP_043379203 |
| Menaquinone via futalosine step 3 (gene SCO4494, often clustered with other genes in menaquinone via futalosine pathway, AsnC-family transcriptional regulator SCO4493 in menaquinone synthesis cluster, menaquinone via futalosine polyprenyltransferase (MenA homolog), UbiD family decarboxylase associated with menaquinone via futalosine) | 5 | 1200 | WP_043381260 |
| Antibiotic biosynthesis monooxygenase | 1 | 348 | WP_043383968 |
| Xylose utilization: Endo-1,4-β-xylanase A precursor (EC 3.2.1.8) (xylose utilization: α-xylosidase, xylulose kinase, xylose-responsive transcription regulator, ROK family, possible alpha-xyloside ABC transporter, ATP-binding component, possible alpha-xyloside ABC transporter, permease component) | 7 | 1389 | WP_030969144.1 |
| Chitin and N-acetylglucosamine utilization: chitinase | 1 | 1812 | WP_030971667 |
*
Gene size shown is representing the coding region.
**
Number of genes present are for genes of the same function. The size of the gene shown is for one representative gene with the corresponding accession number shown.