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. 2018 Oct 4;12(10):e0006747. doi: 10.1371/journal.pntd.0006747

Table 3. Analysis of molecular variance (AMOVA) of Chadian D. medinensis among host species and broad geographic origin.

Grouping N Variance Components % of Variation p - value
Mitochondrial haplotypes
Within Chad by host species 3 Among host species 3.7 0.09
Among hosts within a species 96.3 N/A
Within Chad by region* & host species 6 Among regions 18.7 0.1
Among host species within regions 1.0 0.23
Among hosts within species and region 80.3 0.005
Microsatellites – derived maternal genotypes
Within Chad by host species 3 Among host species 2.7 0.07
Among hosts within a species 9.3 <0.001
Within individual worms 88.0 <0.001
Within Chad by region* & host species 6 Among regions 4.1 0.1
Among host species within regions 1.8 0.03
Among hosts within a species & region 7.9 <0.001
Within individual worms 86.3 <0.001
Microsatellites – pseudo-dominant phenotypes
Within Chad by host species 3 Among host species 5.6 <0.001
Among hosts within a species 94.5 N/A
Within Chad by region* & host species 6 Among regions 8.8 0.1
Among host species within regions 3.9 0.01
Among hosts within a species & region 87.3 <0.001

Statistical significance determined by 5000 permutations of haplotypes, individuals, and populations among individuals, populations, and groups of populations in Arlequin 3.5.

* Regions are defined as north and south of Manda National park.

N, number of groups being evaluated; N/A, statistic not estimated in this analysis