KEY RESOURCES TABLE
REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
PRMT4 (IHC, western blot, chIP) Rabbit | Millipore | 09–818, RRI D AB_1587416 |
Asymmetric-dimethyl H3R17 (IHC, western blot, chIP) Rabbit |
Abcam | ab8284, RRID:AB_306434 |
Asymmetric-dimethyl BAF155 Rabbit | Millipore | ABE1399 |
BAF155 (D7F86) Rabbit | Cell Signaling | 49926 |
Total Histone H3 (C-16) | Santa Cruz | Sc-8654, RRID:AB_2118303 |
Mono-methyl SmB | Sigma Aldrich | S0698, RRID:AB_2193867 |
Asymmetric-Methyl-PABP1 (Arg455/Arg460) (C60A10) | Cell Signaling | #3505, RRID:AB_2298971 |
Anti-PABP antibody [10E10] | Abcam | Ab6125, RRID:AB_2156878 |
GAPDH FL-335 Rabbit | Santa Cruz | Sc-25778, RRID:AB_10167668 |
Donkey Anti-Mouse IgG 680RD | LI-COR- Biosciences | 926–68072 RRID:AB_10953628 |
Donkey Anti-Rabbit IgG 680RD | LI-COR- Biosciences | 926–68073, RRID:AB_10954442 |
Donkey Anti-Mouse IgG 800CW | LI-COR- Biosciences | 926–32212, RRID:AB_621847 |
Donkey Anti-Rabbit IgG 800CW | LI-COR- Biosciences | 926–32213, RRID:AB_621848 |
Biotin-CD3e | BD Biosciences | 553059, RRID:AB_394592 |
Biotin-CD4 | BD Biosciences | 553728, RRID:AB_395012 |
Biotin-CD5 | BD Biosciences | 553019, RRID:AB_394557 |
Biotin-CD8 | BD Biosciences | 553029, RRID:AB_394567 |
Biotin-CD127 | BD Biosciences | 555288, RRID:AB_395706 |
Biotin-Gr-1 | BD Biosciences | 553125, RRID:AB_394641 |
Biotin-B220 | BD Biosciences | 553086, RRID:AB_394616 |
Biotin-Ter119 | BD Biosciences | 553672, RRID:AB_394985 |
APC-c-Kit | BD Biosciences | 553356, RRID:AB_398536 |
Strep-PerCP-Cy5.5 | BioLegend | 405214, RRID:AB_2716577 |
PE-CD71 | Biolegend | 113808, RRID:AB_313569 |
FITC-Ter119 | Biolegend | 116206, RRID:AB_313707 |
FITC-Annexin-V | Biolegend | 640905, RRID:AB_2561291 |
PE-cy7-Sca-1 | Thermo Fisher Scientific |
255981, RRID:AB_469668 |
APC-Mac-1 | Thermo Fisher Scientific |
17–0112, RRID:AB_469343 |
Biological Samples | ||
Human: Umbilical cord blood for CD34 purification | NYBB nybloodcenter.org |
N/A |
Human: AML064 | TCBF-UM | TCBF-AML064 |
Human: AML065 | TCBF-UM | TCBF-AML065 |
Human: AML066 | TCBF-UM | TCBF-AML065 |
Human: AML067 | TCBF-UM | TCBF-AML065 |
Chemicals, Peptides, and Recombinant Proteins | ||
Poly (I:C) HMW | Invivogen | Tlrl-pic-5 |
EPZ025654/GSK3536023 CARM1 tool compound | Epizyme | N/A |
EZM2302/GSK3359088 CARM1 in vivo compound | Epizyme | N/A |
EPZ029751 control compound | Epizyme | N/A |
M3434 Methylcellulose, Mouse | STEMCELL technologies |
03434 |
H4435 Methylcellulose, Human | STEMCELL technologies |
04435 |
Methyl cellulose viscosity 400 cP (In vivo vehicle) | Sigma-Aldrich | M0262 |
Critical Commercial Assays | ||
CellTiter-Glo | Promega | G7572 |
CD34 Microbead Kit, Human | Miltenyi | 130–046-702 |
Senescence β-Galactosidase Staining Kit | Cell Signaling | #9860 |
RNeasy Mini Kit | Qiagen | #74106 |
Deposited Data | ||
RNA-sequencing: CARM1 knockdown in AML cell lines | This paper | GEO: GSE103528 |
Experimental Models: Cell Lines | ||
Human: AML-14 | OSU | RRID:CVCL_8286 |
Human: HEL | ATCC | TIB-180, RRID:CVCL_2481 |
Human: HL-60 | ATCC | CCL-240, RRID:CVCL_A794 |
Human: KASUMI-1 | ATCC | CRL-2724, RRID:CVCL_0589 |
Human: MOLM-13 | DSMZ | ACC-554, RRID:CVCL_RS50 |
Human: MV4–11 | ATCC | CRL-9591, RRID:CVCL_0064 |
Human: NB-4 | DSMZ | ACC-207, RRID:CVCL_0005 |
Human: NOMO-1 | DSMZ | ACC-542. RRID:CVCL_1609 |
Human: OCI-AML3 | DSMZ | ACC-582, RRID:CVCL_1844 |
Human: SET-2 | DSMZ | ACC-608, RRID:CVCL_2187 |
Human: SKNO-1 | DSMZ | ACC-690, RRID:CVCL_2196 |
Human: TF-1 | ATCC | CRL-2003, RRID:CVCL_0559 |
Human: THP-1 | ATCC | TIB-202, RRID:CVCL_0006 |
Human: U937 | ATCC | CRL-1593.2, RRID:CVCL_0007 |
Human: UKE-1 | Coriell | RRID:CVCL_4Z62 |
Experimental Models: Organisms/Strains | ||
Mouse: CARM1 conditional knockout | Laboratory of Dan Tenen |
N/A |
Mouse: B6.SJL-Prprca PEPCb/BoyJ Age: 6–8 weeks |
The Jackson Laboratory |
Stock: 002014 |
Mouse: Vav1-cre B6.Cg-Tg(Vav1-cre) A2Kio/J | The Jackson Laboratory |
Stock: 008610 |
Mouse: Mx1-cre B6.Cg-Tg(Mx1-cre) 1Cgn/J | The Jackson Laboratory |
Stock: 003556 |
Mouse: NOD.Cg-Prkdcscid
Il2rgtm1Wjl Tg(CMV- IL3,CSF2,KITLG)1Eav/MloySzJ |
The Jackson Laboratory |
Stock: 013062 |
Oligonucleotides | ||
Human CARM1-KD1- CTATGGGAACTGGGACACTTT | RNAi Core MSKCC Moffat 2006 |
N/A |
Human CARM1KD2- CGATTTCTGTTCCTTCTACAA | RNAi Core MSKCC Moffat 2006 |
N/A |
Human AML1-ETO-KD1- GCAAGTTGAAACGCTTTCTTA |
Sigma-Aldrich | TRCN0000013366 |
Human AML1-ETO-KD2- GCGCTGAATTGCATTATGGAA |
Sigma-Aldrich | TRCN0000013367 |
See Table S6 for Taqman primer sequences | ||
Recombinant DNA | ||
MIGR1 plasmid-GFP | Addgene Pear 1998 | #27490 |
MIGR1-AE9a-GFP | Addgene Yan 2006 | #12433 |
MIGR1-MLL-AF9-GFP | Addgene Saito 2015 | #71443 |
pCDH-PRMT4-WT-RFP | This paper | N/A |
pCDH-PRMT4-EQ-RFP | This paper | N/A |
pLKO1.1 TRC Cloning vector | Addgene Moffatt 2006 | #10878 |
Software and Algorithms | ||
Dep map |
depmap.org Tsherniak 2017 |
N/A |
FlowJo Version 9.3.3 | TreeStar | N/A |
Other |