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. Author manuscript; available in PMC: 2020 Apr 1.
Published in final edited form as: Genes Brain Behav. 2018 May 10;18(4):e12480. doi: 10.1111/gbb.12480

TABLE 1.

GWAS summaries

Trait GWAS SNPs for PRS



GWAS h2 h2chip PRS r2 Cases Controls SNPs PING PNC
ADHDa 0.76f 0.28k 0.001l 2960 4519 1 206 462 5363

ASDb 0.90g 0.17k *0.008m 3303 3428 9 499 590 10 179 3787

BIPc 0.90h 0.25k 0.028 7481 9250 2 427 221 13 965

MDDd 0.31–0.42i 0.21k *0.006 9240 9519 1 235 110 5622 3752

SCZe 0.81j 0.23k 0.184 34 241 45 604 9 444 231 17 119

The heritability (h2) and chip heritability (h2chip) are representative values for each disorder and suggest a large contribution of common genetic factors to disease liability. The within-trait PRS predictive power (PRS r2) of the GWAS results varies approximately according to the sample sizes.

*

Note that the VE by PRS reported here are likely underestimates for the PRS used here. The ASD and MDD GWAS used in these studies to create PRS were subsets (40% and 80%, respectively) of the sample used for this study.

a

Neale et al39.

b

Cross-Disorder Group of the Psychiatric Genomics40.

c

The Psychiatric GWAS Consortium Bipolar Disorder Working Group41.

d

Major Depressive Disorder Working Group of the Psychiatric GWAS Consortium et al42.

e

Schizophrenia Working Group of the Psychiatric Genomics Consortium43.

f

Faraone and Mick44.

g

Freitag45.

h

Craddock and Sklar46.

i

Sullivan et al47.

j

Sullivan et al48.

k

Cross-Disorder Group of the Psychiatric Genomics Consortium et al49.

l

Hamshere et al50.

m

Anney et al51.