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. 2018 Oct 10;9:1144. doi: 10.3389/fphar.2018.01144

Table 1.

Summary of virtual screening hits as inhibitors of DNMTs.

Study In silico approach Major outcome Reference
Structure-based screening of a lead-like subset of NP from ZINC Cascade docking followed by a consensus approach One computational had reported activity. Additional natural products were identified for screening. Medina-Franco et al., 2011
Ligand- and structure-based screening of 800 NP QSAR model based on linear discriminant analysis and consensus docking. Six consensus hits were identified as potential inhibitors. Maldonado-Rojas et al., 2015
Structure-based screening of 111,121 molecules. Docking-based screening of synthetic screening compounds. Identification of a low micromolar hit with a novel scaffold. Further similarity searching led to the identification of two more potent hits. Chen et al., 2014
Ligand-based screening of 500 compounds. Pharmacophore-based virtual screening. Identification of one inhibitor of DNMT1 with activity in the low micromolar range. The hit showed some selectivity vs. DNMT3B. Hassanzadeh et al., 2017
Structure- and ligand-based screening of 53,000 synthetic compounds. Pharmacophore model, a Naïve Bayesian classification model, and ensemble docking. Two compounds showed DNMT1 inhibitory activity at single but low concentration of 1 μM. Krishna et al., 2017

NP: natural products.