TABLE 1.
Gene | Gene product name | Expression (TPM) in linea
: |
||
---|---|---|---|---|
HeLa | HTB10 | SH-SY5Y | ||
STMN2 | Stathmin 2 | 0.0 | 0.0 | 1,322.5 |
TCEAL7 | Transcription elongation factor A-like 7 | 0.0 | 0.0 | 248.5 |
RGS4 | Regulator of G-protein signaling 4 | 0.0 | 0.0 | 163.7 |
ISL1b | Insulin gene enhancer protein 1 | 0.0 | 0.0 | 55.7 |
NNAT | Neuronatin | 0.0 | 0.0 | 45.8 |
VIP | Vasoactive intestinal peptide | 0.0 | 0.0 | 39.3 |
TAGLN3 | Transgelin 3 | 0.0 | 0.0 | 39.0 |
SNAP25 | Synaptosome-associated protein 25 | 1.8 | 0.7 | 24.6 |
LMO1 | LIM domain only 1 | 0.6 | 0.0 | 17.0 |
CAMK2N1 | Calmodulin-dependent protein kinase II inhibitor 1 | 1.2 | 0.0 | 11.8 |
SCG2 | Secretogranin II | 0.0 | 0.0 | 10.7 |
CDO1 | Cysteine dioxygenase type 1 | 0.0 | 0.0 | 6.9 |
SLC10A4 | Solute carrier family 10 member 4 | 0.0 | 0.0 | 3.1 |
DLX5 | Distal-less homeobox 5 | 0.0 | 0.0 | 2.1 |
DBH | Dopamine β-hydroxylase | 0.0 | 0.0 | 1.7 |
SYT17 | Synaptotagmin 17 | 0.1 | 0.0 | 1.1 |
CUX2 | Cut-like homeobox 2 | 0.0 | 0.1 | 1.1 |
CNTN4 | Contactin 4 | 0.0 | 0.2 | 1.0 |
DPYSL5 | Dihydropyrimidinase-like 5 | 0.0 | 0.2 | 1.0 |
SV2C | Synaptic vesicle glycoprotein 2C | 0.0 | 0.0 | 0.7 |
ETV1 | ETS variant 1 | 0.0 | 0.1 | 0.7 |
DCN | Decorin | 0.0 | 7.9 | 0.6 |
ISL2b | Insulin gene enhancer protein 2 | 0.0 | 0.0 | 0.3 |
NXPH1 | Neurexophilin 1 | 0.0 | 0.0 | 0.1 |
FOXP2 | Forkhead box P2 | 0.2 | 2.2 | 0.0 |
GAD1 | Glutamate decarboxylase 1 | 0.0 | 0.2 | 0.0 |
NELL1 | Neural EGFL-like 1 | 0.0 | 0.3 | 0.0 |
SLC17A7 | Solute carrier family 17 member 7 | 0.0 | 0.6 | 0.0 |
CHATb | Choline acetyltransferase | 0.0 | 0.0 | 0.0 |
OLIG2b | Oligodendrocyte transcription factor | 0.0 | 0.0 | 0.0 |
Shown are expression levels (transcripts per million reads [TPM]) of 26 highly neuron-specific marker genes selected from the Allen Brain Atlas (82–84; http://brain-map.org) and BioGPS (85, 86; http://biogps.org) as examined by RNA sequencing.
Genes selectively expressed in motor neurons were selected from https://en.wikipedia.org/wiki/Neuronal_lineage_marker.