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. Author manuscript; available in PMC: 2019 Sep 18.
Published in final edited form as: Immunity. 2018 Aug 28;49(3):449–463.e6. doi: 10.1016/j.immuni.2018.07.012

Key Resources Table

Reagent/Material Source Identifier
Antibodies:
Alexa Fluora 594 Streptavidin Biolegend Cat #: 405240
Alexa Fluroa 647 Streptavidin Biolegend Cat #: 405237
Anti-Mouse CD8α, Clone: 53-6.7 Biolegend Cat #: 100725
Anti-Mouse CD11b, Clone: M1/70 Biolegend Cat #: 101251
Anti-Mouse CD11c, Clone: HL3 BD Biosciences Cat #: 553801
Anti-Mouse CD11c, Clone: N418 Biolegend Cat #: 117346
Anti-Mouse CD45.1, Clone: A20 Biolegend Cat #: 110726
Anti-Mouse CD45.2, Clone: 104 Biolegend Cat #: 109807
Anti-Mouse CD169, Clone: 3D6.112 Biolegend Cat #: 142419
Anti-Mouse CD197 (CCR7), Clone: 4B12 Biolegend Cat #: 120116
Anti-Mouse CD273 (PDL2), Clone: TY25 BD Biosciences Cat #: 560086
Anti-mouse CD301b (MGL2), Clone: URA-1 Biolegend Cat #: 146806
Anti-Mouse F4/80, Clone: BM8 Biolegend Cat #: 123131
Anti-Mouse Lyve-1, Clone: ALY7 eBioscience Cat #: 53-0443-80
Anti-Mouse Podoplanin, Clone: 8.1.1 Biolegend Cat #: 127406
Anti-rabbit IgG, HRP Cell Signaling Cat #: 7074S
Anti-SHP2 Cell Signaling Cat #: 3397T
Anti-phospho SHP2 (Tyr 542) Cell Signaling Cat #: 3751S
Anti-Siglec1, biotinylated R&D Systems Cat #: BAF5610
Anti-SIGN-R1, biotinylated R&D Systems Cat #: BAF1836
Anti-Src Cell Signaling Cat #: 2108S
Anti-phospho Src (Tyr 416) Cell Signaling Cat #: 2101S
Biotinylated Anti-mouse MCP-2/CCL8 Antibody R&D Systems Cat #: BAF790
Human CCL1-AlexaFluor647 Almac Cat #: CAF-7
Fixable Viability Dye eFluor 780 Invitrogen Cat #: 65-0865-14
Mouse CCL1/I-309/TCA-3 Biotinylated Antibody R&D Systems Cat #: BAF845
TruStain fcX anti-mouse CD16/32, Clone: 93 Biolegend Cat #: 101320
Critical Commercial Assays:
Mouse IL-4 ELISA MAX Standard Biolegend Cat #: 431103
Mouse IFN-g ELISA MAX Standard Biolegend Cat #: 430803
Mouse IL-13 ELISA Ready-SET-Go! eBioscience Ref #: 88-7137-77
RNeasy Plus Micro Kit (50) Qiagen Cat #: 74034
RNeasy Plus Mini Kit (50) Qiagen Cat #: 74134
Naïve CD4+ T Cell Isolation Kit, mouse Miltenyi Biotec Cat #: 130-104-453
CD11c Microbeads UltraPure mouse Miltenyi Biotec Cat #: 130-108-338
Experimental Models: Organisms and Strains:
Mouse: C57Bl/6 Charles River Laboratory Strain No.: 027
Mouse: C57Bl/6 The Jackson Laboratory Strain No.: 000664
Mouse: B6(FVB)-Mgl2tm1.1(HBEGF/EGFP)Aiwsk/J (CD301b-DTR) The Jackson Laboratory Strain No.: 023822
Mouse: Ccr8−/− Chensue et al., 2001 N/A
Mouse: Ccl8−/−Ccl12−/− Tsou et al., 2007 N/A
Mouse: Kaede+ Tomura et al., 2008 N/A
Mouse: Ccr7−/− The Jackson Laboratory Strain No.: 006621
Mouse: B6.Cg-Tg (TcraTcrb)425Cbn/J (OT2m) The Jackson Laboratory Strain No.: 004194
Mouse: B6.SJL-Ptprc Pepc/BoyJ (CD45.1) The Jackson Laboratory Strain No.: 002014
Mouse: REC8 Cyagen Biosciences, this manuscript N/A
Oligionucleotides
mCcl1 FWD (5’-GGCTGCCGTGTGGATACAG-3’) This manuscript N/A
mCcl1 REV (5’-AGGTGATTTTGAACCCACGTTT-3’) This manuscript N/A
mCcl2 FWD (5’-TGGCTCAGCCAGATGCAGT-3’) This manuscript N/A
mCcl2 REV (5’-TTGGGATCATCTTGCTGGTG-3’) This manuscript N/A
mCcl7 FWD (5’-TGGGAAGCTGTTATCTTCAAGACA’3’) This manuscript N/A
mCcl7 REV (5’-CTCGACCCACTTCTGATGGG-3’) This manuscript N/A
mCcl8 FWD (5’-GCGAGTGCTTCTTTGCCTG-3’) This manuscript N/A
mCcl8 REV (5’ TCTGGCCCAGTCAGCTTCTC-3’) This manuscript N/A
mCcl12 FWD (5’-GCTGGACCAGATGCGGTG-3’) This manuscript N/A
mCcl12 REV (5’-CCGGACGTGAATCTTCTGCT-3’) This manuscript N/A
REC8 genotyping primer P1 forward (5’-GAACACAGCAGCAGAAAGAACAC-3’) This manuscript N/A
REC8 genotyping primer P1 reverse (5’-CATGGCGTGTAATATGAGAGACGC-3’) This manuscript N/A
REC8 genotyping primer P2 forward (5’-GTAATAAATGGATGCCCTGCGTAAG-3’) This manuscript N/A
REC8 genotyping primer P2 reverse (5’-ACCTGTCAAGAATGGTGCCAG-3’) This manuscript N/A
REC8 genotyping primer P3 forward (5’-ATCAGTCAGGTACATAACCTCGAG-3’) This manuscript N/A
REC8 genotyping primer P3 reverse (5’-AGTCCATAACCTTCCTCCACG-3’) This manuscript N/A
REC8 genotyping primer P4 forward (5’-GATTGGTATCTGCTTCTGCACTTG=3’) This manuscript N/A
REC8 genotyping primer P4 reverse (5’-GTAGATGAACTCGCCGTCCTG-3’) This manuscript N/A
REC8 genotyping primer P5 forward (5’-CCTTCTCACCACAGCCACTTC-3’) This manuscript N/A
REC8 genotyping primer P5 reverse (5’-TGAGTTTGGACAAACCACAAC-3’) This manuscript N/A
REC8 genotyping primer P6 forward (5’-TGCTTCATGTGGTCGGGGTA-3’) This manuscript N/A
REC8 genotyping primer P6 reverse (5’-GCTTTCATTTCCCATTAGGCACA-3’) This manuscript N/A
Chemicals, Peptides, & Recombinant Proteins:
Macrophage depletion kit of Clodrosome and Encapsome Encapsula Nano Sciences Cat #: 8901
Saponin from quillaja bark Sigma-Aldrich Cat #: S7900-25G
Recombinant Mouse CCL1/TCA-3 R&D Systems Cat #: 845-TC
Recombinant Mouse CCL21/6Ckine R&D Systems Cat #: 457-6C-025
Recombinant Murine MCP-3 (CCL7) PeproTech Cat #: 250-08
Recombinant Murine MCP-2 (CCL8) PeproTech Cat #: 250-14
Recombinant Mouse CCL2/JE/MCP-1 R&D Systems Cat #: 479-JE-010
Recombinant Mouse CCL11/Eotaxin R&D Systems Cat 3: 420-ME
TRIzol Reagent Invitrogen Ref #: 15596018
Collagenase P Sigma-Aldrich Cat #: 11213857001
Dispase II Sigma-Aldrich Cat #: D4693-1G
DNase I, grade II Sigma-Aldrich Cat #: 10104159001
Liberase DH Sigma-Aldrich Cat #: 5401054001
Streptavidin/Biotin Blocking Kit Vector Lab Cat #: SP-2002
Papain Calbiochem Cat: 5125
Ovalbumin Sigma-Aldrich Cat: A5503
LPS Invivogen Cat: tlrl-eklps
Polyinosinic-polycytidylic acid Invivogen Cat:tlrl-picw
PBS Corning Ref #: 21-031-CV
PP2 Sigma-Aldrich Cat #: 529573-1MG
Indo-1, AM Invitrogen Cat #: I1223
RBC Lysis buffer Sigma-Aldrich Cat #: R7757
0.5 M EDTA, pH 8.0 Gibco Cat #: 15575-038
OCT Compound Tissue-Tek Cat #: 4583
RPMI 1640, 1X Corning Ref #: 15-040-CV
Fetal Calf Serum (FCS) Atlanta Biologicals Cat #: S11550
MultiScribe Reverse Transcriptase Thermo Fisher Scientific Ref #: 4311235
GeneAMP dNTP mix with dTTP Thermo Fisher Scientific Ref #: N8080260
MgCl2 Solution 25 mM Thermo Fisher Scientific Ref #: 4486224
10× PCR Buffer II Thermo Fisher Scientific Ref #: 4486220
Oligio d(T)16 Thermo Fisher Scientific Ref #: 100023441
Random Hexamers 50 μM Thermo Fisher Scientific Ref #: 100026484
RNase Inhibitor Thermo Fisher Scientific Ref #: 100021540
FastStart Essential DNA Green Master Roche Cat #: 25595200
Software:
Prism v 7.0c GraphPad https://www.graphpad.com/demos
Zen Blue Zeiss https://www.zeiss.com/microscopy/us/products/microscope-software/zen.html
Imaris Bitplane http://www.bitplane.com/download
Softmax Pro Molecular Devices https://www.moleculardevices.com/systems/microplate-readers/softmax-pro-7-software
BD FACS Diva 8 BD Biosciences http://www.bdbiosciences.com/us/instruments/clinical/software/flow-cytometry-acquisition/bd-facsdiva-software/m/333333/overview
FlowJo (version 10) Tree Star https://www.flowjo.com/solutions/flowjo/downloads