Table 2.
Fop | Polypeptide length | GC1 | GC2 | GC3 | |
---|---|---|---|---|---|
Ortholog | |||||
Ks | 0.09026 | −0.0958 | − 0.10494 | − 0.0116 | 0.0672 |
Ka | − 0.18988** | − 0.10997 | − 0.25635** | − 0.25051** | − 0.06667 |
Ka/Ks | − 0.18418** | − 0.15026** | −0.23272** | − 0.23049** | −0.0526 |
Paralog | |||||
Ks | 0.10751 | 0.09914 | −0.08703 | 0.03401 | −0.10284 |
Ka | −0.36815** | 0.11903 | −0.24856 | −0.36392** | − 0.37883** |
Ka/Ks | −0.58738** | − 0.04473 | −0.2972* | − 0.54631** | −0.29905* |
Fop frequency of optimal codons, GC1 GC content at first codon positions, GC2 GC content at second codon positions, GC3 GC content at third codon positions, Ks synonymous substitution ratio, Ka nonsynonymous substitution ratio, Ka/Ks nonsynonymous to synonymous substitution ratio
*indicates significance at P < 0.05; **indicates significance at P < 0.01