. 2018 Oct 16;19:749. doi: 10.1186/s12864-018-5108-9

Table 3.

Summary of the initially selected candidate of thermal stress biomarkers for qRT-PCR development using gill tissue. Presented for each gene are the temperature stress response signatures, EST ID for the 44 K cGRASP microarray, and Atlantic salmon gene ID. The symbol ‘x’ indicates that the gene was included in the thermal response signature for the specified analysis

Gene Name	Gene Symbol	EST ID	Gene ID	Chromosome	Intersect 2007, 2008, 2009 (CS0101i)	Jeffries et al. [9] (ES0013)	2007 Sockeye (EX0102a)	2008 Sockeye (EX0103a)	2009 Pink (EX0101a)	Jeffries et al. [30] publication: (16 K)	Quinn et al. [32] publication Table S1 (32 K)	Anttila et al. [12] publication Table S1 (16 K)	Quinn et al. [33] publication Table S2 (32 K)	Lewis et al. [34] (4 h)
Protein folding and rescue
Serpin H1 precursor	SERPINH1	C044R036	106,581,278	20	x	x	x	x	x
		C265R019			x	x	x	x	x
		C205R085			x	x	x	x	x
		C101R077			x
		CA063723								x	x
		C009R155	106,613,072	9	x	x	x	x	x
		C236R132			x	x	x	x	x
Heat shock protein HSP 90-alpha	HSP90AA1	C020R155	106,608,136	6	x	x	x		x
Heat shock protein HSP 90-alpha		DY732008									x
Heat shock protein 90 kDa alpha (cytosolic) class B member 1	HSP90AB1	C101R112	100,136,360	15	x
		CB493619								x	x	x	x
		CB501628								x	x	x	x
		CA767842									x	x
		CB502806									x
Heat shock protein HSP 90-alpha. 1	HSP90AA1	C198R091	106,571,588	15	x			x
Heat shock protein HSP 90-alpha. 1		CB498021									x	x	x	x
Heat shock protein HSP 90-alpha	HSP90AA1	C182R027	100,380,418	15	x	x	x	x
		C015R121			x		x	x
		CA062155									x	x	x
Heat shock cognate 70 kDa protein	HSC71	C059R036	106,613,013	9			x		x
Heat shock 70 kDa protein	HSP70	C035R126	106,607,232	6			x	x
		C185R016					x	x
		C229R092					x	x
		C249R043					x	x
FK506-binding protein 10 precursor	FKBP10	C171R003	106,601,011	3	x	x	x
		C067R011	106,607,277	6	x	x	x	x
		C165R115			x	x	x
		C124R099			x	x	x
		C154R080			x	x
		C070R119	106,579,165	19	x
		C014R004			x
Protein disulfide-isomerase A4 precursor	PDIA4	C263R094	106,578,385	19	x
Oxidative stress/ion binding/signal transduction
Selenoprotein W	SEPW1	C035R144	106,563,412	11	x	x	x	x
		C258R108			x	x	x	x
		C052R159			x	x	x	x
		C155R164			x	x		x
		C142R109			x			x
Mitogen-activated protein kinase kinase kinase 14	MAP3K14	C014R149	100,380,862	3	x	x		x
Mitogen-activated protein kinase kinase kinase 14		C060R057			x			x
Parkinson disease (autosomal recessive, early onset) 7 (Protein DJ-1)	PARK7	C246R153	100,136,349	22	x	x
Metabolic processes
Cytochrome C oxidase	COX6B1	C193R155	106,579,249	19	x
		C074R104				x
		C042R086	106,579,245	19		x
		C149R170				x
Mannose-P-dolichol utilization defect 1 protein	MPDU1	C007R028	106,608,952	7	x	x	x	x
Isocitrate dehydrogenase 3 (NAD+) beta	IDH3B	C125R081	106,565,197	12	x	x	x
Transcription/translation/protein transport
Eukaryotic translation initiation factor 4A, isoform 2	EIF4A2	C096R117	106,568,752	14	x	x	x		x
Eukaryotic translation initiation factor 4A, isoform 2		C092R059			x			x
Eukaryotic translation initiation factor 4E nuclear import factor 1	EIF4ENIF1	C240R154	100,196,839	12	x	x	x	x
Splicing factor, arginine/serine-rich 9	SFRS9	C025R120	100,195,385	1	x	x	x	x	x
Splicing factor, arginine/serine-rich 9		C074R026			x	x	x	x	x
Splicing factor, arginine/serine-rich 2	SFRS2	C078R152	106,601,525	3	x	x	x	x	x
		C187R068			x	x	x		x
		C254R016			x	x	x		x
		C036R063			x	x	x	x
		C084R083			x	x	x
		C174R079			x		x
		CA064151										x
		CB493433									x
		EG927609									x
Eukaryotic translation elongation factor 2	EEF2	C262R107	106,569,524	14	x			x
		CB498321								x	x
		C102R083	106,600,009	3	x	x	x	x
Cold-inducible RNA-binding protein B	CIRBP	C026R122	106,613,740	10	x				x
		CA041959										x
		C251R142	106,613,741	10	x		x
		CA048095								x		x
		CB499204										x
		C107R130	106,573,600	16	x	x	x	x	x
		C192R015	106,573,597	16	x
Sec1 family domain-containing protein 1	SCFD1	C205R010	100,380,743	1	x	x	x	x
Growth regulation
Tubulin alpha-1A chain	TUBA1A	C036R054	100,196,438	16	x
		C075R011
		C062R114	106,573,955	16	x
Tubulin alpha chain, testis-specific	TUBA1A	C145R015	106,562,989	11	x		x
Cell cycle and apoptosis
Serine/threonine-protein kinase Nek4	NEK4	C163R137	106,565,859	12	x			x
DNA repair and cell structure
Keratinocytes-associated transmembrane protein 2 precursor	KCT2	C102R089	100,194,831	13	x	x
Ubiquitin-conjugating enzyme E2 Q2	UBE2Q2	C182R024	106,587,229	26	x	x		x
Ubiquitin-conjugating enzyme E2 Q2		C089R055			x			x
Transmembrane transport
Transmembrane protein 185	zgc:63572	C160R143	106,563,673	11	x	x	x
Protein transporter activity
AP-3 complex subunit sigma-1	AP3S1	C061R023	106,585,846	24	x	x	x
Co-repressor of transcription
Zinc finger MYND domain-containing protein 11	ZMYND11	C190R138	100,380,823	3	x		x	x	x