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. 2018 Sep 4;42(5):2415–2436. doi: 10.3892/ijmm.2018.3852

Table VI.

11 SNPs significantly (P<1.59×10−6) associated with chronic kidney disease in the exome-wide association study.

Gene SNP Nucleotide substitutiona Amino acid substitution Chromosome Position MAF (%) Allele OR P-value (allele frequency)
COL6A5 rs200982668 G/A E2501K 3 130470894 1.3 0.21 5.08×10−9
MARCH1 rs61734696 G/T Q137K 4 164197303 1.2 0.22 1.97×10−8
MUC17 rs78010183 A/T T1305S 7 101035329 1.8 0.29 2.04×10−8
MOB3C rs139537100 C/T R24Q 1 46615006 1.2 0.23 4.91×10−8
PLCB2 rs200787930 C/T E1106K 15 40289298 1.2 0.23 4.94×10−8
CXCL8 rs188378669 G/T E31* 4 73741568 1.2 0.23 7.83×10−8
VPS33B rs199921354 C/T R80Q 15 91013841 1.2 0.23 7.86×10−8
TMOD4 rs115287176 G/A R277W 1 151170961 1.2 0.23 1.25×10−7
ADGRL3 rs192210727 G/T R580I 4 61909615 1.3 0.25 1.88×10−7
ZNF77 rs146879198 G/A R340* 19 2934109 1.2 0.24 2.95×10−7
COL6A3 rs146092501 C/T E1386K 2 237371861 1.2 0.24 2.99×10−7

Allele frequencies were analyzed using Fisher's exact test.

a

Major allele/minor allele. SNP, single nucleotide polymorphism; MAF, minor allele frequency; OR, odds ratio.