Table III.

Top 10 significantly enriched GO terms in three categories by genes co-expressed with homeobox A11.

Category/term	Count	P-value	FDR
Biological process
GO:0048598-Embryonic morphogenesis	44	6.79×10−10	0.000001
GO:0001501-Skeletal system development	45	7.03×10−10	0.000001
GO:0007389-Pattern specification process	37	4.66×10−8	0.000084
GO:0048754-Branching morphogenesis of a tube	17	7.79×10−8	0.000140
GO:0048568-Embryonic organ development	28	1.02×10−7	0.000183
GO:0048706-Embryonic skeletal system development	18	1.71×10−7	0.000306
GO:0048704-Embryonic skeletal system morphogenesis	15	5.22×10−7	0.000938
GO:0001763-Morphogenesis of a branching structure	17	5.32×10−7	0.000955
GO:0001944-Vasculature development	33	9.30×10−7	0.001669
GO:0051270-Regulation of cell motion	28	1.08×10−6	0.001945
Cellular component
GO:0044421-Extracellular region part	79	7.0×10−6	0.009522
GO:0005912-Adherens junction	23	7.0×10−6	0.010227
GO:0005925-Rocal adhesion	18	9.0×10−6	0.013065
GO:0070161-Anchoring junction	24	1.2×10−6	0.017438
GO:0005924-Cell-substrate adherens junction	18	1.6×10−6	0.022116
GO:0015629-Actin cytoskeleton	31	2.5×10−6	0.035229
GO:0030055-Cell-substrate junction	18	3.2×10−6	0.046211
GO:0031012-Extracellular matrix	35	9.3×10−6	0.133109
GO:0005856-Cytoskeleton	99	1.1×10−5	0.161576
GO:0043235-Receptor complex	16	5.6×10−5	0.798459
Molecular function
GO:0003779-Actin binding	38	2.0×10−6	0.002752
GO:0008092-Cytoskeletal protein binding	49	8.0×10−6	0.012857
GO:0019838-Growth factor binding	18	1.3×10−6	0.020705
GO:0005520-Insulin-like growth factor binding	9	1.7×10−6	0.026080
GO:0005509-Calcium ion binding	72	8.8×10−6	0.135240
GO:0043565-Sequence-specific DNA binding	51	2.3×10−5	0.357942
GO:0003700-Transcription factor activity	71	8.2×10−5	1.256619
GO:0004970-Ionotropic glutamate receptor activity	6	1.4×10−4	2.177531
GO:0005234-Extracellular-glutamate-gated ion channel activity	6	1.8×10−4	2.828013
GO:0019899-Enzyme binding	42	2.2×10−4	3.271727

GO, Gene Ontology; FDR, false discovery rate.