Table III.
Reaction step | Amplification parameters | Reaction system |
---|---|---|
First step | 95°C denaturation for 3 min followed by 5 cycles at 95°C for 30 sec. The Ta was then reduced from 57°C to 53°C over 4 cycles with a reduction of 1°C per cycle. The annealing time was 30 sec and extension was conducted at 72°C for 30 sec. Subsequently, 30 cycles were conducted at 95°C for 30 sec, Ta 53°C for 30 sec, 72°C for 30 sec, and a final extension step was performed at 72°C for 2 min. | Each 25-μl reaction tube contained 5 μl 5X KAPA2G buffer A, 5 μl 5X KAPA enhancer, 0.1 μl KAPA2G Robust HotStart DNA polymerase (Kapa Biosystems, Inc., Wilmington, MA, USA), 0.5 μl 10 μM dNTP Mix (Takara Bio, Inc., Otsu, Japan), l μl each 10 M primer, and 3 μl DNA template. The total volume was brought to 25 μl with PCR-specific water. |
Second step | The same as the first step. | The same as the first step. The amplified DNA product obtained from the first step was used as the DNA template for the second step. |
PCR, polymerase chain reaction; Ta, annealing temperature.