Table 1.
Database | Genes | Transcripts | Expression | Function annotation | Conservation |
---|---|---|---|---|---|
NCBI | 3208 | 4869 | × | × | × |
Ensembl | 2839 | 4133 | × | × | × |
NONCODE | NA | 8360 | × | × | × |
zflncRNApedia | NA | 2181 | √ | × | × |
ZFLNC | 13 604 | 21 128 | √ | √ | √ |
The above information is based on NCBI Danio rerio Annotation Release 104, Ensembl Zebrafish release 79, NONCODEv4 and zflncRNApedia. The zebrafish lncRNAs in NONCODEv4 and zflncRNApedia are transcripts level.