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. 2018 Oct 18;8:15413. doi: 10.1038/s41598-018-33752-w

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Physical locations of predicted secreted protein genes, all protein-coding genes and PHI-base genes in relation to regions of repetitive sequences and GC content distribution in the assembled genome of T. horrida. From outside to in: Location of genes encoding predicted secreted proteins (purple) in the assembled genome; The distribution of transposable elements (blue) in the T. horrida genome; Single-copy DNA regions (red) of the T. horrida genome; Locations of the PHI-base gene homologues (green) involved in pathogen–host interactions; Graphs of GC (black) contents. Areas of low GC correspond well to regions of repetitive DNA. The maps were drawn with OmniMapFree.