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. 2018 Oct 18;8:15358. doi: 10.1038/s41598-018-33762-8

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Linear discriminant analysis (LDA) combined effect size measurements (LEfSe) analysis of cecal microbiota in broiler chickens (n = 7). (A) Species with significant difference that have an LDA score greater than the estimated value (the default score is 2.0). The length of the histogram represents the LDA score. (B) The cladogram diagram shows the microbial species with significant differences between the two groups. The species classification at the level of phylum, class, order, family, and genus exhibit from the inside to the outside. Red and green nodes in the phylogenetic tree represent microbial species that play an important role in control and treatment groups, respectively. Yellow nodes represent species with no significant difference. E, control group; G, treatment group.