Table 2.
Summary Statistics of MIs Detected in Each Species
| Apis mellifera | Camponotus floridanus | Harpegnathos saltator | Nasonia vitripennis | Polistes canadensis | Solenopsis invicta | Trichogramma pretiosum | |
|---|---|---|---|---|---|---|---|
| # of predicted MIs | 5,126 | 6,327 | 8,375 | 9,644 | 1,342 | 10,574 | 4,889 |
| # of mCGs in MIs (% of total mCGs) | 29,254 (37.1%) |
47,804 (55.8%) |
78,490 (69.9%) |
85,007 (74.4%) |
8,293 (52.7%) |
112,819 (71.5%) |
30,141 (50%) |
| Total MI length (bp) (% of genome) |
1,043,247 (0.45%) |
1,803,969 (0.77%) |
2,969,693 (1.01%) |
3,355,006 (1.13%) |
210,235 (0.099%) |
4,291,930 (1.08%) |
1,136,846 (0.58%) |
| Avg. MI length (bp) | 213.15 | 286.12 | 355.59 | 348.88 | 157.66 | 406.89 | 233.53 |
| Avg. mCG density per MI (# of mCGs/MI length) | 0.03 | 0.02 | 0.03 | 0.02 | 0.07 | 0.03 | 0.03 |
| # of MIs overlapping with genesa (% of all MIs) | 4,958 (96.7%) |
6,082 (96.1%) |
7,845 (93.7%) |
9,079 (94.1%) |
1,020 (76%) |
9,843 (93.1%) |
4,603 (94.2%) |
| # of MIs overlapping exclusively with genesa (% of all MIs) | 4,788 (93.4%) |
5,961 (94.2%) |
7,606 (90.8%) |
8,873 (92.0%) |
1,010 (75.3%) |
9,477 (89.6%) |
4,469 (91.4%) |
| # of MIs overlapping with exons/exclusively with exons (% of all MIs) | 4,830/3,117 (94.2%/60.8%) |
5,763/2,634 (91.1%/41.6%) |
7,319/2,704 (87.4%/32.3%) |
8,184/3,381 (84.9%/35.1%) |
741/524 (55.2%/39.0%) |
8,839/3,412 (83.6%/32.3%) |
4,433/2,926 (90.7%/59.8%) |
| # of MIs overlapping with introns/exclusively with introns (% of all MIs) | 1,794/178 (35.0%/3.5%) |
3,404/382 (53.8%/6.0%) |
5,011/592 (59.8%/7.1%) |
5,739/1,206 (59.5%/12.5%) |
478/273 (35.6%/20.3%) |
6,300/1,160 (59.6%/11.0%) |
1,881/242 (38.5%/4.9%) |
| # of MIs overlapping with exon–intron boundaries/only one exon–intron boundary (% of all MIs) | 1,637/705 (31.9%/13.8%) |
3,051/1,312 (48.2%/20.7%) |
4,461/1,690 (53.3%/20.2%) |
4,672/1,635 (48.4%/17.0%) |
205/92 (15.3%/6.9%) |
5,252/2,123 (49.7%/20.1%) |
1,649/611 (33.7%/12.5%) |
| # of MIs overlapping with promoters (% of all MIs) | 172 (3.4%) |
117 (1.8%) |
146 (1.7%) |
199 (2.1%) |
30 (2.2%) |
308 (2.9%) |
213 (4.4%) |
a
Defined as the region spanning the transcript start site to the transcription termination site.