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Number of transcripts available for differential expression analysis
| BAVc vs. TAVc | BAVc vs. TAVn | TAVc vs. TAVn | |
|---|---|---|---|
| edgeR, DESeq, and SAMSeq | 19,973 | 19,998 | 19,969 |
| Cuffdiff | 16,956 | 24,750 | 13,306 |
BAVc, calcified bicuspid aortic valve; TAVc, calcified tricuspid aortic valve; TAVn, noncalcified tricuspid aortic valve. The results of edgeR, DESeq, and SAMSeq are based on counts obtained from HTSeq.
