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. Author manuscript; available in PMC: 2018 Oct 22.
Published in final edited form as: Methods Mol Biol. 2018;1698:37–65. doi: 10.1007/978-1-4939-7428-3_3

Table 3.

Cre-loxP-mediated conditional knock-outs or knock-ins affecting erythropoiesis

Floxed allele Gene product description Process under investigation Phenotype/process affected Reference
Zbtb7a Transcription factor: Zinc finger and BTB domain containing 7A Hematopoietic Stem Cell (HSC) maintenance Embryonic lethal, anemia [52]
Myc Transcription factor: Myc proto-oncogene protein Primitive Hematopoiesis Embryonic lethal, blocks HSC differentiation, absence of primitive erythrocytes [53]
SCL/Tal-1 Transcription factor Hematopoietic Stem Cells Embryonic lethal, genesis of HSCs, differentiation into erythroid and megakaryocytic progenitors, anemia, thrombocytopenia [54]
Asxl1 (also Asxl1: nlacZ/nGFP knock-in) Transcription factor: Additional sex combs like transcriptional regulator 1 Erythropoiesis Embryonic lethal, myelodysplastic syndrome [55]
Meis1 Transcription factor: Homeobox protein Meis1 Erythropoiesis Primitive hematopoietic repopulating cells and megakaryocytic/erythroid progenitor expansion, abnormal HSC function [56]
Klf1 Transcription factor: Krüppel-like factor 1 Hemoglobin Switching Embryonic lethal, β-like globin gene expression, anemia [57]
Klf2 Transcription factor: Krüppel-like factor 2 Hemoglobin Switching Embryonic lethal, β-like globin gene expression, anemia [57]
Bcl1 1a Transcription factor: C2H2 type zinc-finger Hemoglobin Switching γ-globin (HbF) repression [58]
Mi2/β Chromodomain helicase DNA binding protein 4 Hemoglobin Switching γ-globin (HbF) repression [59]
Atg7 Interacting protein: Ubiquitin - activating enzyme E1-like protein Erythropoiesis Mitochondrial autophagy, splenomegaly, death via severe anemia [60]
Med1 Mediator complex subunit 1: required for SP1 activation as part of CRSP complex Erythropoiesis Block in erythroid development [61]
Taf10 Interacting protein: TATA-box binding protein associated factor 10 Erythropoiesis Embryonic lethal [62]
Gfi 1b Transcription factor: Growth factor independent 1 B transcription repressor Erythropoiesis Abnormal HSC function [63]
Tsc 1/Rptor Interacting protein: Tuberous sclerosis 1 interacting protein/regulatory associated protein of mTOR complex 1 Erythropoiesis Role of mTORC1 in erythropoiesis, increased neonatal mortality, macrocytic/microcytic anemia [64]
Ldb1 Interacting protein: LIM domain binding 1 Erythropoiesis Embryonic lethal, abnormal erythroid gene expression, defective primitive erythropoiesis, continuously required for definitive erythropoiesis and megakaryopoiesis [65]
Pit1 Interacting protein: Solute carrier family 20 (phosphate transporter) member 1 Erythropoiesis Erythroid maturation, anemia, myelodysplastic syndromes [66]
Sf3b1K700E
knock-in
Interacting protein: Splicing factor 3b subunit 1 Erythropoiesis Impaired erythropoiesis and aberrant splicing, myelodysplastic syndromes [67]
Miz-1 Transcription factor: Myc-interacting zinc finger protein 1 Erythropoiesis Embryonic lethal, required for embryonic and stress-induced erythropoiesis, perturbed erythroid differentiation and development, severe anemia [68]
Brg1 Transcription factor: Brahma-related gene 1 Erythropoiesis, Vascular Development Embryonic lethal, altered globin expression, anemia, erythropoietic/vascular abnormalities [69]
RhoA Hub protein: Ras homolog family member A Erythropoiesis Embryonic lethal, cytokinesis in erythroblasts, failed definitive erythropoiesis, anemia [70]
Spry1 Interacting protein: Sprouty RTK signaling antagonist 1 Erythropoiesis Perturbed erythroid development, reticulocytosis, heightened splenic erythropoiesis, regulator of erythropoiesis during anemia, transducer of EPOR signals, and candidate suppressor of Jak2 activity [71]
Vegf Growth factor: Vascular endothelial growth factor Erythropoiesis Erythropoietic lineage development, increased Gatal levels, increased erythroid differentiation [72]
Stat5 Transcription factor: Signal transducer and activator of transcription 5A Erythropoiesis Reduced transferrin receptor gene expression, microcytic, hypochromic anemia [73]
cdc42 Rho GTPase Cdc42: Cell division control protein 42 homolog Erythropoiesis Balance between myelopoiesis and erythropoiesis, altered gene expression, fatal myeloproliferative disorder, anemia, splenomegaly [74]
Tfr2 Membrane protein: Transferrin receptor 2 Iron Metabolism Liver iron overload, inadequate hepcidin levels, iron-deficient anemia [75]
Mfrn1 Mitochondrial iron transporter: Mitoferrin-1 Iron Metabolism Embryonic lethal, reduced erythroblast formation, severe anemia [76]
Piga Enzyme: Phosphatidylinositol glycan anchor biosynthesis class A Erythropoiesis Embryonic lethal, paroxysmal nocturnal hemoglobinuria (PNH) [45]
Jak2V617F knock-in Non-receptor tyrosine kinase: Janus kinase 2(JAK2) Erythropoiesis Polycythemia-like disease (all major features of human polycythemia vera) [77]
Phd1,
Phd2,
Phd3
Enzyme: Prolyl hydroxylase domain protein 1, 2, or 3 (3 PHD isoforms) Erythropoiesis Erythrocytosis [78]
Epo Growth factor: Erythropoietin (EPO) Erythropoiesis Embryonic lethal, chronic, normocytic, normochromic anemia, pre-clinical model for anemia of Epo deficiency [79]
pRb Tumor suppressor protein: Retinoblastoma protein Erythropoiesis Defects in cell cycle regulation and mitochondrial function, anemia, myelodysplastic syndromes [80]
Trim33 Transcriptional corepressor: Tripartite motif-containing 33, also known as transcriptional intermediary factor 1 gamma (TIF1-γ) Erythropoiesis Embryonic lethal [81]
Bcl-x Anti-apoptotic factor: Bcl-2-like protein 1 Erythropoiesis Required for the survival of erythroid cells at the end of maturation, which includes enucleated reticulocytes in circulation, hemolytic anemia, hyperplasia of immature erythroid cells, splenomegaly [82]
Nix Pro-apoptotic factor: BH3-only-like protein Erythropoiesis Reticulocytosis, thrombocytosis, splenomegaly, splenic and bone marrow erythroblastosis, reduced apoptosis during erythrocyte maturation [83]
Tr2/Tr4 Transcription factor: Testicular receptor 2 (TR2), Testicular receptor 4 (TR4) Hemoglobin Switching Embryonic lethal, γ-globin gene repression [84]
Zbp-89 (Zfp148) Transcription factor: Zinc finger protein 148 Hematopoiesis Stress erythropoiesis, erythroid lineage development, anemia, thrombocytopenia, myeloid and B lymphoid lineage anomalies, altered HSC gene expression [85]
Trim28 Transcriptional cofactor: Tripartite motif-containing protein 28, also known as transcriptional intermediary factor 1 beta (TIF1β) Erythropoiesis Cell- autonomous development of immature erythroblasts in bone marrow, essential for erythroblasts differentiation, anemia, increased apoptosis, reduced erythroid transcription factor expression, reduced heme biosynthesis [86]
Ccbel Lymphangiogenic factor: Collagen and calcium-binding epidermal growth factor domain-containing protein 1 Primitive Erythropoiesis Secreted lymphangiogenic CCBE1 is essential for fetal, but not postnatal erythropoiesis, loss of CCBE1 signaling impairs erythroblastic island formation and function, not required in hematopoietic cells, severe anemia, increased apoptosis [87]
Sur Inhibitor of apoptosis: Survivin Erythropoiesis Essential for steady-state hematopoiesis and survival of adult, high level expression critical for proper erythroid differentiation, bone marrow depletion, pancytopenia, erythrocyte abnormalities, hypocellular spleen, hematopoietic cell death [88]
Runxl Transcription factor: Runt-related transcription factor 1 Hematopoiesis Embryonic lethal, not required in adult hematopoietic compartment, abnormal HSCs, defective T- and B-cell maturation, inefficient platelet production, mild myeloproliferative phenotype [89]
α4 Transmembrane receptor: α4 integrin subunit Hematopoietic Stem Cells Progenitor cell influx into the peripheral blood, delayed erythroid and myeloid regeneration, hematopoietic abnormalities [90]
Raf-1 Enzyme: RAF proto-oncogene serine/threonine-protein kinase Erythropoiesis Embryonic lethal, anemia, accelerated erythroid differentiation [91]
Jak2 Non-receptor tyrosine kinase: Janus kinase 2 Hematopoiesis Embryonic lethal, impaired hematopoiesis, splenic atrophy, severely diminished erythropoiesis and thrombopoiesis, modestly affected granulopoiesis and monocytopoiesis [92]
Abcb7 Mitochondrial ATP-binding cassette sub-family B member 7 Hematopoiesis X-linked sideroblastic anemia with ataxia (XLSA/A) due to inhibition of heme biosynthesis, damaged mitochondria, pancytopenia, hypocellular bone marrow [93]
Ufbp1 Inhibitor of apoptosis in ER-stressed cells: Ufm1 binding protein 1 Hematopoiesis Embryonic lethal, impaired hematopoiesis, defective erythroid development, pancytopenia, suppressed GATA-1 and KLF1 expression [94]
Ezh2 Enzymatic component of Polycomb Repressive Complex 2: Enhancer of zeste homolog 2 Hematopoietic Stem Cells Embryonic lethal, essential for fetal liver, but not bone marrow erythropoiesis, defective HSC expansion, compromised lymphopoiesis, reduced H3K27me3 levels suggesting epigenetic status of HSCs is developmentally regulated, anemia [95]
Rcor1 Transcriptional corepressor: REST (repressor element-1 silencing transcription factor) corepressor 1 Hematopoietic Stem Cells Embryonic lethal, promotes erythropoiesis by repressing HSC and/or progenitor genes, as well as genes and signaling pathways that lead to myeloid cell fate, block in fetal erythropoiesis at the proerythroblast stage, anemia [96]
Setd8 Histone Methyltransferase: monomethylates histone H4 lysine 20 (H4K20mel) Erythropoiesis Embryonic lethal, defect in primitive erythropoiesis, abnormalities in cell cycle progression, regulates erythroid maturation, represses Gata2 expression, severe anemia [97]
Smad4 Signal transduction: Mothers against decapentaplegic homolog
4
Erythropoiesis Not required for adult erythropoiesis, severe anemia due solely to blood loss, iron deficiency [98]
Ulk1 Enzyme: Serine/threonine-protein kinase Erythropoiesis Autophagy machinery that leads to the elimination of organelles in erythroid cells [99]
Ck2β Enzyme: serine-threonine kinase composed of two catalytic (α) and two regulatory (β) subunits Hematopoiesis Embryonic lethal, regulates definitive hematopoiesis of all hematopoietic cell lineages [100]
Flvcr1a Heme exporter membrane protein: Feline leukemia virus subgroup C receptor 1 Erythropoiesis Embryonic lethal, heme export control, severe macrocytic anemia, splenomegaly, iron accumulation in duodenum, liver and spleen, reduced BFU-E and CFU-E, defective erythroid differentiation [101]
Rhau RNA helicase: RNA helicase associated with AU-rich element Hematopoiesis Embryonic lethal, hemolytic anemia, differentiation defect at the proerythroblast stage [102]
Add3 Adducins: Skeletal protein involved in the assembly of spectrin-actin network RBC membrane skeleton structure Animals were viable and presented no obvious erythroid cell defects [103]
cyclin ET74A T393A knock-in Cell cycle regulator: Complexes with the CDK2 cyclin-dependent kinase subunit Erythropoiesis Links ubiquitin-proteasome pathway control of G1-to-S-phase progression to regulation of metabolism and gene expression in terminally differentiating bone marrow erythroid cells, abnormal erythropoiesis characterized by a large expansion of abnormally proliferating progenitors, impaired differentiation, dysplasia, and anemia, models early stage human refractory anemia/myelodysplastic syndrome [104]
Rps14 40S ribosomal subunit protein S14 Erythropoiesis Erythroid differentiation defect dependent on p53 characterized by apoptosis during transition from polychromatic to orthochromatic erythroblasts, age-dependent progressive anemia, megakaryocyte dysplasia, block in erythroid differentiation, loss of HSC quiescence [105]
Rps6 40s Ribosomal subunit protein S6 Erythropoiesis Hypoproliferative macrocytic anemia, granulocytopenia, thrombocytosis, lymphopenia (model for Diamond-Blackfan Anemia and myelodysplastic syndrome) [106]
Ppp2ca Enzyme: Serine/threonine phosphatase, protein phosphatase 2A Erythropoiesis Perturbed definitive erythropoiesis characterized by fetal liver atrophy, reduced Terll9+ cell number, atypical expression patterns of molecular markers, reduced colony formation, reduction in definitive globin gene expression [107]
Dicer Enzyme: Endoribonuclease Hematopoietic Stem Cells Down-regulation of erythroid genes, defective erythroid linage differentiation [108]
Ml1 Enzyme: Mixed-lineage leukemia Hematopoietic Stem Cells Embryonic lethal, reduced numbers of HSCs, abnormal HSC function [109]
Ufm1 Ubiquitin-like modification system: Ubiquitin-fold modifier 1 Hematopoietic Stem Cells Embryonic lethal, diminished hematopoietic development, increased HSC death, severe anemia, cytopenia, elevated endoplasmic reticulum stress, blocked autophagic degradation, increased ROS [110]
Rac1, Rac2 Rac GTPases: Racl and Rac2 regulates many aspects of intracellular actin dynamics Erythropoiesis Abnormal BFU-E and CFU-E morphology, decreased megakaryocyte-erythrocyte progenitors in bone marrow, increased splenic erythropoiesis [111]
Adar1 RNA-editing enzyme: Adenosine deaminase acting on RNA 1 Hematopoietic Stem Cells Embryonic lethal, abnormal HSC function, increased HSC apoptosis [112]
Sod2 Enzyme: Superoxide dismutase 2 Hematopoietic Stem Cells Increased ROS in erythroid progeny, diminished erythrocytes, decreased ferrochelatase activity, extramedullary hematopoiesis, systemic iron redistribution, abnormal gene expression (hematopoietic transcription factors, globins, and iron-response genes), changes in histone posttranslational modification [113]