Table 1. List of genes significantly up-regulated in CAV1-/- MEFS.
Only protein-encoding genes where q < 0.05 are shown, the full RNA-seq dataset is contained in S1 File. N = 4 biological replicates, each individual replicate comprising analysis of RNA pooled from all embryos from four mice.
| UP in CAV1-/- | ||
|---|---|---|
| log2(fold change) | q value | |
| Rpsa-ps10 | -8.37741 | 0.00692166 |
| Boll | -3.9005 | 0.00692166 |
| Hp | -2.6409 | 0.00692166 |
| Cxcl13 | -2.56011 | 0.00692166 |
| Map4k2 | -2.00809 | 0.0375919 |
| Col6a6 | -1.63478 | 0.00692166 |
| Tnn | -1.51824 | 0.00692166 |
| Prelp | -1.47382 | 0.00692166 |
| Dpt | -1.39127 | 0.00692166 |
| Acp5 | -1.20669 | 0.0176127 |
| Sfrp2 | -1.20043 | 0.0340759 |
| Il33 | -1.19136 | 0.0262263 |
| Ntrk2 | -1.06095 | 0.00692166 |
| Col28a1 | -1.04536 | 0.0220741 |
| Galnt16 | -1.00456 | 0.00692166 |
| Gdf10 | -0.998608 | 0.00692166 |
| Dcx | -0.957355 | 0.00692166 |
| Tril | -0.955059 | 0.00692166 |
| Mapt | -0.936393 | 0.0302349 |
| Egfl6 | -0.896372 | 0.0375919 |
| Wisp2 | -0.885063 | 0.0442584 |
| Fat4 | -0.870303 | 0.00692166 |
| Fzd4 | -0.869915 | 0.00692166 |
| Abcc9 | -0.869901 | 0.0262263 |
| Tbxa2r | -0.853815 | 0.0262263 |
| Brd3 | -0.842777 | 0.00692166 |
| Itih5 | -0.83026 | 0.0126897 |
| Adamts15 | -0.829148 | 0.0375919 |
| Igfbp3 | -0.805513 | 0.0126897 |
| Fbn2 | -0.795042 | 0.00692166 |
| Parm1 | -0.793557 | 0.00692166 |
| Fras1 | -0.786727 | 0.00692166 |
| Dner | -0.78094 | 0.00692166 |
| Tmem26 | -0.765602 | 0.0302349 |
| Ror1 | -0.746148 | 0.0176127 |
| Fmod | -0.737573 | 0.0176127 |
| Dcn | -0.730383 | 0.0262263 |
| Sema6a | -0.723499 | 0.0408339 |
| Myh11 | -0.715594 | 0.00692166 |
| Prss35 | -0.685936 | 0.0442584 |
| Cdkn1c | -0.681699 | 0.00692166 |
| Myh3 | -0.680278 | 0.0176127 |
| Actn2 | -0.671471 | 0.0375919 |
| Sfrp1 | -0.640639 | 0.0176127 |
| Lrrc15 | -0.610529 | 0.0126897 |
| Mylk | -0.560148 | 0.0302349 |