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. 2018 May 14;34(21):3601–3608. doi: 10.1093/bioinformatics/bty387

Fig. 2.

Fig. 2.

Overview of our method to index and query ARG variation graphs. This figure shows the indexing (index) and alignment (seed and align) steps of the method. In the alignment step, once a query read has been seeded against a variation graph, a hierarchical local alignment process is performed, and the alignment is scored before being reported