Table 2. De novo assembly and homological search in the Plant Database.
De novo assembly | |
Number of de novo assembled contigs | 147,487 |
Number of filtered contigs | 106,155 |
N75 (bp) | 536 |
N50 (bp) | 804 |
N25 (bp) | 1,721 |
Plant DB cluster 50 | |
Hit contigs | 35,892 |
Unique hit contigs | 19,036 |
Mutiple hit contigs | 16,856 |
No hit | 14,967 |