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. 2018 Oct 24;8:15701. doi: 10.1038/s41598-018-34171-7

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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S2′ secondary cleavage site is occluded. Superimposition of the SARS-CoV S 2P, uncleaved, cleaved and ACE2-bound structures reveals no structural changes within this region. The S2′ site after amino acid R797 is shielded from cleavage by an adjacent loop and the fusion peptide which packs against an N-terminal region of S2 HR1.