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. 2018 Oct 24;62(11):e01142-18. doi: 10.1128/AAC.01142-18

TABLE 7.

PCR primers

Primer name Primer sequencea
msbA-f2 AAACGTCTCGAATTCATGCATAACGACAAAGATCTCTC
msbA-r2 AAAATCTAGAtCATTGGCCAAACTGCATT
PBAD-msbA-f AAAAGAGCTCGATGCATAATGTGCCTGTC
PBAD-msbA-r AAAAGAGCTCGTTCACCGACAAACAACAG
msbA-KO-noPkan-f TGGATAACGGGTAGAATATGCGGCTATTTCAACAAATGCTGGTTTTTTGAGAAGTTCCTATACTTTCTAGAGAATAGGAACTTCAGGAGGAATTCATGATTGAACAAGATGGATTGC
msbA-KO-kan-r GGCAGCAATAGCCGCCACAAAGGGGATTCACCAGACCAGATTTTTTCGATCATATGAATATCCTCCTTAGTTCCTATTC
SmR-f AAAAAAGACTCCCCGTCAGAAGCACACGGTCACACTG
SmR-r AAAAAAAAATCGAGACCCCTGCTTATCCACGGAATCT
msbA-f ATGCTGGTTTTTCATATGCATAACGAC
msbA-r CGGGATCCTCGAGTCATTGGCCAAACTGCATTTTG
a

Bolded sequence at 3' ends is homologous to template sequence. Additional bolded sequence in msbA-KO-noPkan-f primer introduces an FRT recombinase site.