Table 1.
Specices | Gene | Direction | Location | Size | Anticodon | Start codon | Stop codon | Intergenic nucleotide |
---|---|---|---|---|---|---|---|---|
Apostictopterus fuliginosus | tRNA Met | F | 1–74 | 74 | ATG | 0 | ||
tRNA Ile | F | 75–138 | 64 | ATC | 3 | |||
tRNA Gln | R | 142–210 | 69 | CAA | 73 | |||
ND2 | F | 284–1,297 | 1,014 | ATT | TAA | 1 | ||
tRNA Trp | F | 1,299–1,363 | 65 | TGA | −8 | |||
tRNA Cys | R | 1,356–1,420 | 65 | TGC | 12 | |||
tRNA Tyr | R | 1,433–1,498 | 66 | TAC | 7 | |||
COI | F | 1,506–3,036 | 1,531 | CGA | T– | 0 | ||
tRNA Leu | F | 3,037–3,104 | 68 | TTA | 0 | |||
COII | F | 3,105–3,783 | 679 | ATG | T– | 0 | ||
tRNA Lys | F | 3,784–3,854 | 71 | AAG | 2 | |||
tRNA Asp | F | 3,857–3,923 | 67 | GAC | 0 | |||
ATP8 | F | 3,924–4,082 | 159 | ATT | TAA | −7 | ||
ATP6 | F | 4,076–4,753 | 678 | ATG | TAA | −1 | ||
COIII | F | 4,753–5,538 | 786 | ATG | TAA | 2 | ||
tRNA Gly | F | 5,541–5,607 | 67 | GGA | 0 | |||
ND3 | F | 5,608–5,961 | 354 | ATT | TAA | 3 | ||
tRNA Ala | F | 5,965–6,032 | 68 | GCA | −1 | |||
tRNA Arg | F | 6,032–6,100 | 69 | CGA | 7 | |||
tRNA Asn | F | 6,108–6,172 | 65 | AAC | 4 | |||
tRNA Ser | F | 6,177–6,237 | 60 | AGC | 0 | |||
tRNA Glu | F | 6,238–6,304 | 67 | GAA | 38 | |||
tRNA Phe | R | 6,343–6,407 | 65 | TTC | 0 | |||
ND5 | R | 6,408–8,148 | 1,741 | ATT | T– | 0 | ||
tRNA His | R | 8,149–8,215 | 67 | CAC | 0 | |||
ND4 | R | 8,216–9,554 | 1,339 | ATG | T– | −1 | ||
ND4L | R | 9,554–9,838 | 285 | ATG | TAA | 2 | ||
tRNA Thr | F | 9,841–9,905 | 65 | ACA | 0 | |||
tRNA Pro | R | 9,906–9,970 | 65 | CCA | 2 | |||
ND6 | F | 9,973–10,509 | 537 | ATA | TAA | −1 | ||
Cytb | F | 10,509–11,660 | 1,152 | ATG | TAA | 3 | ||
tRNA Ser | F | 11,664–11,730 | 67 | TCA | 19 | |||
ND1 | R | 11,750–12,688 | 939 | ATG | TAA | −6 | ||
tRNA Leu | R | 12,683–12,757 | 75 | CTA | 0 | |||
lrRNA | R | 12,758–14,172 | 1,415 | 0 | ||||
tRNA Val | R | 14,173–14,237 | 65 | GTA | −1 | |||
srRNA | R | 14,237–15,010 | 774 | −1 | ||||
AT-rich region | 15,011–15,417 | 407 | 0 | |||||
Barca bicolor | tRNA Met | F | 1–68 | 68 | ATG | 0 | ||
tRNA Ile | F | 69–132 | 64 | ATC | 3 | |||
tRNA Gln | R | 136–204 | 69 | CAA | 72 | |||
ND2 | F | 277–1,290 | 1,014 | ATT | TAA | 4 | ||
tRNA Trp | F | 1,295–1,359 | 65 | TGA | 8 | |||
tRNA Cys | R | 1,352–1,419 | 68 | TGC | 13 | |||
tRNA Tyr | R | 1,433–1,497 | 65 | TAC | 7 | |||
COI | F | 1,505–3,035 | 1,531 | CGA | T– | 0 | ||
tRNA Leu | F | 3,036–3,103 | 68 | TTA | 0 | |||
COII | F | 3,104–3,782 | 679 | ATG | T– | 0 | ||
tRNA Lys | F | 3,783–3,853 | 71 | AAG | 1 | |||
tRNA Asp | F | 3,855–3,920 | 66 | GAC | 0 | |||
ATP8 | F | 3,921–4,082 | 162 | ATC | TAA | −7 | ||
ATP6 | F | 4,076–4,753 | 678 | ATG | TAA | −1 | ||
COIII | F | 4,753–5,538 | 786 | ATG | TAA | 2 | ||
tRNA Gly | F | 5,541–5,606 | 66 | GGA | 0 | |||
ND3 | F | 5,607–5,960 | 354 | ATT | TAA | 3 | ||
tRNA Ala | F | 5,964–6,026 | 63 | GCA | 0 | |||
tRNA Arg | F | 6,027–6,093 | 67 | CGA | 3 | |||
tRNA Asn | F | 6,097–6,163 | 67 | AAC | 4 | |||
tRNA Ser | F | 6,168–6,229 | 62 | AGC | 0 | |||
tRNA Glu | F | 6,230–6298 | 69 | GAA | −2 | |||
tRNA Phe | R | 6,297–6,360 | 64 | TTC | 0 | |||
ND5 | R | 6,361–8,098 | 1,738 | ATT | T– | 0 | ||
tRNA His | R | 8,099–8,164 | 66 | CAC | −1 | |||
ND4 | R | 8,164–9,504 | 1,341 | ATG | TAA | −1 | ||
ND4L | R | 9,504–9,788 | 285 | ATG | TAA | 2 | ||
tRNA Thr | F | 9,791–9,855 | 65 | ACA | 0 | |||
tRNA Pro | R | 9,856–9,921 | 66 | CCA | 2 | |||
ND6 | F | 9,924–10,460 | 537 | ATA | TAA | −1 | ||
Cytb | F | 10,460–11,611 | 1,152 | ATG | TAA | 1 | ||
tRNA Ser | F | 11,613–11,678 | 66 | TCA | 18 | |||
ND1 | R | 11,697–12,635 | 939 | ATG | TAA | −6 | ||
tRNA Leu | R | 12,630–12,703 | 74 | CTA | 0 | |||
lrRNA | R | 12,704–14,122 | 1,419 | 0 | ||||
tRNA Val | R | 14,123–14,187 | 65 | GTA | 0 | |||
srRNA | R | 14,188–14,960 | 773 | 0 | ||||
AT-rich region | 14,961–15,574 | 614 | 0 |
In the column intergenic length, the positive number indicates interval base pairs between genes, while the negative number indicates the overlapping base pairs between genes.