Table 4. SSU rRNA (16S) gene prediction, taxonomy and coverage.
The last-common ancestor (LCA) classification and top hits were retrieved from sina analyses. The bins with SSU rRNA (16S) genes directly predicted from the genome bins (without manual assignment) are indicated by an asterisk (*). Coverage values were computed with BBMap. NA, not applicable.
| Strain | SSUref_128 taxon | SSUref_128 top hit | Bin affiliation | Coverage | |
|---|---|---|---|---|---|
| ULC335 | Snowella | Snowella litoralis 1LT47S05 | bin0 | bin1 | 37.00 |
| ULC335 | Brevundimonas | Uncultured Brevundimonas sp. | bin0 | 22.23 | |
| ULC335 | Flavobacterium | Uncultured bacterium clone N4_091 | bin0 | bin2 | 58.44 |
| ULC335 | Unclassified | na | bin0 | 10.25 | |
| ULC335 | Hydrogenophaga | Hydrogenophaga palleronii | bin0 | 9.64 | |
| ULC335 | Rhodobacteraceae | Uncultured bacterium clone ZWB3-3 | bin0 | 7.79 | |
| ULC007 | Leptolyngbya | Phormidesmis priestleyi ANT.LG2.4 16S | bin0 | bin1 | 85.23 |
| ULC027 | Unclassified | na | bin2 | bin2* | 54.08 |
| ULC041 | Leptolyngbya | Leptolyngbya antarctica ANT.LACV6.1 | bin0 | bin1 | 97.23 |
| ULC065 | Arenimonas | Uncultured bacterium clone a33 | bin0 | bin2 | 40.66 |
| ULC065 | Synechococcus | Cyanobium sp. JJ17-5 | bin0 | bin1 | 165.13 |
| ULC066 | Limnobacter | Uncultured bacterium clone S25 | bin0 | bin3 | 14.15 |
| ULC066 | Unclassified | na | bin0 | 21.51 | |
| ULC066 | FamilyI | Pseudanabaena biceps PCC 7429 | bin0 | bin1 | 50.06 |
| ULC068 | FamilyI | Pseudanabaena sp. Sai012 | bin0 | bin1 | 68.53 |
| ULC073 | Sphingomonadaceae | Blastomonas sp. AAP25 | bin6 | bin6* | 31.87 |
| ULC073 | Leptolyngbya | Leptolyngbya antarctica ANT.LACV6.1 | bin0 | bin1 | 33.60 |
| ULC073 | Limnobacter | Uncultured bacterium clone B3NR69D12 | bin0 | bin2 | 19.58 |
| ULC077 | Unclassified | na | bin0 | bin1 | 52.80 |
| ULC082 | Hydrogenophaga | Uncultured Comamonadaceae bacterium | bin0 | 18.85 | |
| ULC082 | Brevundimonas | Uncultured alphaproteobacterium clone KWK6S.50 | bin0 | 25.08 | |
| ULC082 | Unclassified | na | bin0 | 32.77 | |
| ULC082 | Pseudomonas | Pseudomonas sp. WCS374 | bin0 | 32.71 | |
| ULC082 | Synechococcus | Synechococcus sp. MW97C4 | bin0 | bin1 | 93.93 |
| ULC084 | Brevundimonas | Uncultured alphaproteobacterium | bin0 | bin2 | 31.39 |
| ULC084 | Synechococcus | Uncultured bacterium clone MS81 | bin0 | bin3 | 87.30 |
| ULC084 | Limnobacter | Uncultured bacterium clone B3NR69D12 | bin0 | bin1 | 16.99 |
| ULC129 | Phormidium | Uncultured bacterium clone GBII-52 | bin0 | bin1 | 52.71 |
| ULC146 | Sphingomonadaceae | Blastomonas sp. AAP25 | bin3 | bin3* | 81.39 |
| ULC146 | Flavobacterium | Flavobacterium sp. Leaf359 | bin0 | bin2 | 25.91 |
| ULC146 | Hydrogenophaga | Hydrogenophaga sp. Root209 | bin1 | bin1* | 61.13 |
| ULC165 | Unclassified | na | bin0 | 85.20 | |
| ULC165 | Unclassified | na | bin0 | 98.62 | |
| ULC179 | Devosia | Devosia psychrophila strain Cr7-05 | bin0 | 97.88 | |
| ULC179 | Unclassified | na | bin0 | 16.43 | |
| ULC179 | Polymorphobacter | Uncultured Sphingomonadaceae bacterium | bin3 | bin3* | 91.23 |
| ULC186 | FamilyI | Leptolyngbya sp. 0BB32S02 | bin0 | bin1 | 116.04 |
| ULC187 | FamilyI | Pseudanabaena sp. Sai010 | bin0 | bin1 | 81.01 |