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. 2018 Sep 18;7:e37110. doi: 10.7554/eLife.37110

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© 2018, Välimäki et al

This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.

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Appendix 1—figure 9. — Hi-C, TADs and CpG methylation around rs2736100 with an 1Mbp flank. The needle plot shows the meQTL associations (dashed lines at 10% FDR; green line denotes the two SNPs; gray ticks denote all CpGs tested; blue needle for positive coefficient, red for negative coefficient) for tumors (above x-axis; n_AA = 8, n_AB = 32, n_BB = 16) and normals (below x-axis; n_AA = 5, n_AB = 22, n_BB = 7). The only significant meQTLs were seen around TERT.